| Id Trinity | FTRINITY_DN54040_c2_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_141027 |
| Sequence | CTGAAATCAGAAAAGGGTTCAAAATTTGCATCTAGGGTTTATACATTTATATTCAACACCGTCTTCGACAATTCGGAAAACAAAATCGAAAATTTCTTCT CATTCTTCATACCATCAATGACTTCCAGGGATAACGACCAAGCTCCGCCACACCATCACCCACCTCACTTGAGCAGCCTCGTCGTCCGCCCCGAAGCCAC CTCCATCGCCGACACCGCCGCTGATCGTGGCGGCGATTTCGAATCTGGAGAGTTCCACCGTGATCACCGTTCCCCTTATTCCCGCTCCGATCGATATCCC GGTGACACTGGATATAGAATTTGTGCAGGTTCTGCGTCTCCAGTTCACCGCAGAGGTGCAAATGACCGCCTCGGTTCTGATTACAATCACTTGTCACGAA GCCGTGGATTTGGCAGTGGGAGAGATCCTGGTAGATATCGAGACCCTTCACCTCCATATATTCGAGGAAGAGTTGGTGGCAGACCAATTGGCAGAGCTTT TGATAGGCCTGGCTTTGTTCCTGGGCCAACTAGAGGAGAGGGCAACAGTAGAAACAATCCCAATGTGCGTCCAAGGGAGGGTGATTGGATTTGTCCTGAT CTACGGTGTGGTAATCTTAACTTTGCAAGGAGGGACCACTGTAACAAGTGTAATAGATCTCGACCTGCGCCTGCTGGAAGTCCCCGGAGGGCATATCCTG GTCCTCCACCACTTCGTACCCCTCATAGACGCTTTCCTGGTTCGCCGGAAAGGACTGTGGTTGGCTATAGATCTCCTCCTCGTGGGTTGGCAAGGGATGG GCCTAGAGAGTATGGATCTGCTGCTCTGCCACCCCTCAGGCATGAAGACAGGTTCGCAGAACCTCATGTGCACAGAGACAGGATTGATTACCTAGAAGAT GCCTACAGGGGGAGGAACAAGTTCGATAGGCCACCACCCCCGATGGACTGGGATGGTAGGGACCGTGGACGGGATGTTTTTTCTAATGAAAGGAAAGGAT TTGAGAGGAGGCCACTGTCTCCCCCGGCACCACTATTGCCATCACTTCCTCCACACCATGGTGGTCGGTGGACTCAAGATGTGAGAGAGAGGAGCCGCTC TCCAATAAGAGGTGGCCCACCATCGAAAGACCACCGCCGTGATATGTTTGTGAATCGTGGAAGAGATGATAGGCGTGCCTTGGGACGTGATAGAATTGGA GGAATGTATTAGCCTCTGCCCTTTCCTGTAATTTGTGATGTGAACTTTAGCCCCATTAAATGTTGAAGAGATTAGCTCTTGAATCTCCGGATTAGGGTAC ACTGAAAAATCATTGGTAGTATGTTCATAGCTGCGGATCATATTTAGTCCTTTGTTCTGATCTGTCATACTGTTTGAAAATGGAGAATACACATTTTTTG ACTCCACTTCCTGAATCTCCACTCTACATTTAAACTTGTGTTTGGTTGCCAATGTAATTTAGATTATATTCCTGAGAATGTGATACATGAGAAATCACAT TCTAACTTAAAAGATGAGAATCTAAACTTTCATTCCAGGAATGTGAAAATGTTTAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_39175; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_141027
| Blastp | Zinc finger Ran-binding domain-containing protein 2 from Pongo with 57.89% of identity |
|---|---|
| Blastx | TATA-binding protein-associated factor 2N from Homo with 64.29% of identity |
| Eggnog | Zinc finger, RAN-binding domain containing 2(ENOG4111QXA) |
| Kegg | Link to kegg annotations (100174707) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019436626.1) |
| Pfam | Zn-finger in Ran binding protein and others (PF00641.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |