Ll_transcript_141342

• Id Trinity: FTRINITY_DN54043_c2_g1_i6
• Name Transcript: Ll_transcript_141342
• Sequence: GGGGGAGCAGGTTCGAGTCCATGCTTCGAAAGTTGGTTTGGAGAGCAATGTATTTGTTGCGAATGCATTGATTGGTATGTATGGGAAGTGGGGGTTCGTG GAGGAGGGCCAGAAGGTCTTTGAATTGGCCATCGAGTATAGAGATTTGTATTCGTGGAACACCATGATTGCTGCCTACGTTGGATCGGGTAACATGAGTC GAGCTAAGGAAGTGTTTGATGAAATGCCAGAGCAAGATGTTGTGTCATGGAGTACTATAATAGCTGGTTATGTTCAGGTTGGTCGTTTCATGGAGGCTTT GGATTTCTTTCACAACATGTTGCAAGTAGGTCCCAAACCAAATGAATATACCCTTGTAAGTGCTCTTTCAGCCTGTTCAAATCTAGTAGCATTGGATCAG GGAAAGTGGATCCATGTTTATATTGGGAGGGGTGAGATTAAGATGAATGAGAAGCTTCTTGCCAGCATTGTTGACATGTATGCGAAGTGCGGCGAGATAG AGTCTGCATCAAGAGTTTTCTGTGAGCACAACGTGAAGCACAGGGTTTGGCCTTGGAATGCCATGATTGGTGGGCTTGCAATGCATGGAAAAGCCACTGA GGCTATAACTATCTTTGAACAAATGAAGGCAGAGAAAGTTTCTCCTAATAAAGTCACATTTGTTGCTTTATTAAATGCTTGTAGCCATGGCTATATGGTC AAGGAGGGAAAATTCTATTTCAGATCGATGGTTAGTGATTATGGAATTAACCCAGAAGTAGAGCATTATGGATGCATGGTGGATCTACTGAGTCGTGCTG GCCTCTTGAAGGAGGCAGAAGAAATGATTGCTAGTATGCCCATGGCTCCAGATGTAGCAATTTGGGGAGCACTGCTAAATGCTTGTAGAATCTATAAAGA TATGGAGCGGGGATATAGAATTGGCAAAATAATTAAAGAAATGGATCCGAACCATATAGGGTGTCATGTTTTATTGGGCAATATATATTCTACTTCGGGG AGATGGAATGATGCAAGGATGCTGAGAGAGAAGAATGACAATAGTGAGAGAAAAAAAGTTCCTGGTTGCAGTTCAATTGAATTAAAGGGGGTATTCCATC AATTCCTTGTTGGAGATCAATCACACCCTCAAAGTAAGGAGATTTATTTATTTTTGACTGAGATGGAATGATGCAAGGATGCTGAGAGAGAAGAATGACA ATAGTGAGAGAAAAAAAAGTTCCTGGTTGCAGTTCAATTGAATTAAAGGGGGTATTCCATCAATTCCTTGTTGGAGATCAATCACACCCTCAAAGTAAGG AGATTTATTTATTTTTGACTGAGATGATGATCAGGTTAAAGAATGCTGGGTATTTTCCAGAATTAGGGGAACTTTTGCTTGATATTGATGATGAGGAAGA TAAAGAGACTGCTCTGTCTATACACAGCGAGAAGTTGGCTATTGCTTTTGGGTTGATGAACACAGCACCTGGAACTCCAATTCGCATTGTGAAGAACTTA AGAGTTTGTGGGGATTGTCATCAAGCAACAAAGTTCATCTCGAAGGTTTACGATCGAGTAATTATAGTTAGAGACAGGACAAGGTATCATCACTTCAAAG ATGGAATCTGTTCTTGCAAAGACTACTGGTAGATAAAGAGAGTGCTACACATGTCAAATAAGTAACAACATGCATGCTTCCCTATTTGCCTGCTCAGATT GTTTACTACTATTTGCATGATAAGTTTCAAAAAATTGCAGATACTGATCAAGAAATTGAATTCTGGATTGTTTATCAAAAGATGGCAAGCTCTTTCACAT ATCCAGTTGGCGGGGCATAGATATACGCTTGATGATAGATTTTAGCTAGGGTGAAAGATAATCTTGCAATGATCTGCTCCTTTACTTGCAGTAAAGTTGG AAGCACTAAAGTTTTTCTCTATTTGCATTTTTTAGCAGTGCTGCAGTTGACATATTAAAGGTGCTCTTTTGCTTTACATGCTGCTGTCTGGTTCCTGAAC ATTCCATGCCTCTGGTTGTCTCAATTCTTTACAGCTCCACATAATGAAAGTTGTTGAGGTGGATTAAGAGATGGGACTGGACTAATGGAGTCACAGAGAG CAAGCAATACAGAATTAGAAAGTGAGATCTAGACATTGGAAGCTGAAAAGAGGATGGCAGCTTGCCCCAACTCTTGTTGCATCTTATTTTTATTAGAATA TATTGAAGTATTTTAGAATATCTTAAATTACATTATAGAGAATATCGAGATGATCCTTAGATATAGAATTAGAGAGAATATCTCATATTATAATTTATCT CCTTACGCCCATTCATTATTTGACATGTATCTTAATCTTCTTTTTATAATATATTTTAAAATGGAAATTCATAGAAAGAATGGAAACATTACACATGTCA AACAACAAAAGGA
• Tissue: flowers
• Gene name: LI_gene_39216;
• Additional information: details;

Expression of Ll_transcript_141342

FPKM

• FPAB: 0.3
• FPNAB: 0
• LF1: 0
• LF2: 0
• LF3: 0
• LF4: 0
• UF1: 0
• UF2: 0
• UF3: 0
• UF4: 0

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_141342

• Blastp: Pentatricopeptide repeat-containing protein At3g62890 from Arabidopsis with 45% of identity
• Blastx: Pentatricopeptide repeat-containing protein At3g62890 from Arabidopsis with 43.62% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT3G62890)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019465124.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;