Id Trinity | FTRINITY_DN54054_c1_g2_i20 |
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Name Transcript | Ll_transcript_141413 |
Sequence | ACCCAACAAGCTTTACTTTCCATATGAACCTGGTAAGCAAGTTAGGAGCGCCATCACAATTAAAAACACTTGCAAGTCTCATGTAGCTTTCAAGGTGCGG TGTCTATATCTACTATTCCTTTTTTTCTAATTAATCTATGTTTCATTTAGAGTATTGACATATAACATTGGGAATTTTTATTAAAATACTTCCAAGATGT TGATAAATTTTGCTATAGTAACTAGAGCATGATAGGTCGTGTAATATATTGAACAAGACACCAAGAATGTGTTAATCTAGTGGTGTAAGGCCCTACTAGA TCCCCAAGGTCGAGAGTTTGATTCTTGGGAGTGACACTTGTTGGAGGGGCAACTACAAACCCGGAAAGAGATTAGTTCTTTGCCCAAAAAGGTAAAGGAT ACCCTTGATAGTACCAAAAAAAATGCTGAACAAGGCCAAATCTTCATATTTGCATTTCACCACGTATTTGATAGGATTATGAATAATTCAGCTGTTTATT GAAATATCAATTTTACATAGCTTGCTATATTTATCCACTCTTAATGTTACTGCTGATGGTGATGTTTTGTTTAGTTTCAAACAACTGCTCCCAAGAGTTG TTATATGCGCCCACCAGGTGGTGTTCTTGCACCTAGTGAAAGTATAATTGCAACCGTGTTTAAGTTTGTGGAGCCGCCAGAAAACAACGAGAAACCAATT GAGCAGAAAAGCAGGGTTAAGTTTAAAATCATGAGCTTAAAAGTGAAAGGTGAAATGGATTATGTACCAGAACTGTTTGATGAGCAAAGGGATCAAGTAT CGGTGGAGCAAATTCTGCGGGTGGTTTTCCTGGACCCTGAACACTCTAACCCTGCCATGGATAAGCTTAAACGGCAGTTGGCTGAGGCTGAGGCTGCACT GGAAGCAAGAAAGAAGCCCCCGGAGGAGACAGGTCCTCGAATAGCTGGGGAAGGACTTGTTATAGATGAATGGAAAGAAAGAAGAGAAAGATACCTGGCA AAGCAACAGGTTGAAGGGGTTCCATCAATGTAAAGTTTTTTGGTGTCTTGTTCTTAATGTTCTCCAGTTTCATGTTGAGAAAATGAATTCCTTGATCACC AATCTGGCAGATGTGGTCGAGTGACCCAGCAAAGTACTGTAATGAGATATTGTGAAATATTTCTTTGTTCTATTTCAGTAGCATATTTGAGGTGTTATAT GATATTGAATTAATACTGTGGCTGGTGGTATTTAATTGTACTTTTGTATTAGCTCCTATAACTTGTTCATAGTTTTAGCTTGTTTGAAGCGAAATTGATA GTAACAGAACTGGTATTTTACCTTCATGTAACTTATAGTTGGGGTTGAATTTGCCTAATATTTTATGGGAGTGGCTAGCCCCTTTGTTTTCTTGTTCACC TTTCTCTTCATCTTACAGTTATGCAGTAGTAAAATGTTTCCATGAACAAGAAAGATCCTTGATTAGTTACAAAAAGAAAAGTGTGATCAAGTTATTAGAC TCTCCATAGTAGTTGTTCTTATAGGAATATAGGAATAAGAGCATTTTTACTTTATTTTTCACTGTGTTGTTCTTATTTCTTGAGTTCTGTTCTTAAATAA GAACAATTCTTGGTCTTTCTTAACCAAATGAGAGTGAGGAG BLAST |
Tissue | flowers |
Gene name | LI_gene_39346; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_141413
Blastp | Vesicle-associated protein 4-2 from Arabidopsis with 82.39% of identity |
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Blastx | Vesicle-associated protein 4-2 from Arabidopsis with 83.89% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (AT4G21450) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019448981.1) |
Pfam | MSP (Major sperm protein) domain (PF00635.25) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |