| Id Trinity | FTRINITY_DN54064_c0_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_143074 |
| Sequence | TCTTATCATATCTGTAATCTTTTTGCATCAAGTGATATCTGCCTGGTTTTACTTTCTATATTACATAATTTTTATTATTTTCAAATCTGTGGAATCATTT ATTGGACATGTAACACGTTAATATTAACTTCTAATGGGTAATTACTATCAAGTTTGTACATCCTATATCCTTGATGACATGTTTGCTTAAGGATAAACAT TGTGGATATGTGAGTAATTTATTATTTGATATATATTGGATTTGTTTTATGTCATGGCATATAATTTTTGTTCTTCAGATTAGAAAACATGGGAGCCCTT CAAGTGGACAAAGTCGTTCATAGACACCAGGTTTGGCGGCTATTCTCTTGTGTATGGTTACATGGTGGGGTTGTCCATGTGCTCGCCAACATGTTGAGTC TTGTTTTTATTGGAATTCGTCTTGAGCAGGAGTTTGGGTTTGTTCGAATTGGATTGCTTTATGTGATATCTGGTTTTGGAGGGAGTTTACTGTCTTCTCT ATTCATACAATCAGGTATCTCAGTTGGTGCTTCTGGTGCACTATTTGGCTTACTAGGAGCCATGCTATCGGAGCTCTTAACAAATTGGACAATATATGCT AATAAGTGTGCTGCATTATTGACTCTTATTGTCATCATTGTGATCAATTTAGCTGTTGGAATCCTTCCACACATGGACAATTTTGCTCATATTGGAGGAT TTATCTCCGGTTTCCTTCTTGGATTTGTTTTTCTTATTCGCCCTCAGTATAAGTGGGTTAGCCAAAGAAATTATCCTTCTGGATATGTTTCCCGTCCGGT GAACTCTAAGCACAAACCTATTCAGTATGTACTCTGGGTCATCTCTTTCATACTACTTTGTGCTGGATTGGTAGCTGGGACGGTTTTGCTCCTACGAGGG GTTGACTTGAATAATCACTGCTCTTGGTGTCATTATTTAAGTTGTGTTCCTACCTCAAAATGGAGCTGCAAACCACAAGAAGTTTATTGTGAGGTGGGTG ATGCTACTATAAGTTCTAATGATAGATTGAATGACTTATGTGACCGGGTGCATGGAAAACTGATCCAAAATATAGTTGTCTATGTCCTCCCGATAGTTTA GTAGTATGAGTTTTAGAGCATAAGGTGACAGTATATTATTCCCATGAAAATGAAGACATAGAAGAAAAGTAATTTAGTAACTTAGCATCTATGCATGTTC TCTAGTGTACCAGCAATCTGTTAATATGCATGTATAATGTAGTTTCCTAGTCTCTATTCTGTATATTATTGAATACCTGACAATTTCAACCGTTAAAGAA CACTGTTTTAGAATTTTATTCTCTTGTCTAACTTGGTTTCGTCCTTCGACACTCACATCCTCTGCTTCCATTTTGCAGTCAACCCAAATGGGGAACCAAC TCAACATAACGTGTTTGAGCAATGGGAAAAGTGACATTTTTTCTGTGTCAAATAATAGCCCTTCCCAGGCTCACGAACTATGTTCTAGTCTTTGCAGTTG ATATATGTACAAATACAATATCTCTTGGCGCGTTACCATTGAACAGATTTATGCATGTTATTCATTCTTGTGACCACAGAGAAAGTCTTCAATGGTGCAT TTCTAATGATGGTTGTTGTGTCTGCCATCATTGGTATATTCTTGTCACTGTTATTACCATTGATCTTTTCTAACTGAAGAGGATGAGCCAAAGTTTATAT CGTAAGGAAGATTAGTAACAATCAAAGATTGGAAGTGTTGTCAAATGTACAATGTACAATGTGCATTGCATTAGATTATTAGTTGAGTATCTTGTTATGG TTTATTGCTACAAACCTACATTCTGATATCTCTATCCTGTAGTCATTACTGTCATGAACCAACGCTTCTTCAATCTTTGATTGGTTTTATATCTTTGATA GGCTTCCTCACTCAATTTATTTGGACTTGAAATTTTACATTTTTATTAGGCAGCAAGGATTTAATTTGAGATCAGTTAATGAAGCTATGAGATAGTGACA CAGGTTTTTCAAGAAAAAAAAAAGTAAAGTTTTAGATTTAAAATTATTTTTAAATAAAAAATATAAATCTTTAAACATATTATAGTCTCACATTCCGA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_39447; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_143074
| Blastp | RHOMBOID-like protein 1 from Arabidopsis with 79.57% of identity |
|---|---|
| Blastx | RHOMBOID-like protein 1 from Arabidopsis with 79.41% of identity |
| Eggnog | rhomboid family(COG0705) |
| Kegg | Link to kegg annotations (AT2G29050) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019454071.1) |
| Pfam | Rhomboid family (PF01694.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |