Ll_transcript_143079

• Id Trinity: FTRINITY_DN54064_c0_g1_i15
• Name Transcript: Ll_transcript_143079
• Sequence: ATAAGGGTATTATTTTTTTAGTTTTAAAAATGCTTTTATAAAAAATATTGAAACATGATATAAATTATTTCTTTATACCATAATATATAAGTCAAAAGAA TGAGTTAAATTTTTTTTCCTAGTAAATATACATTACATATATAGTTAAGAAAGTAATGAAACGTGAGTCAAATATAACCAAACAGGCTTCAGAACAATGG ACATTGATTCAAATGATACATGCTTGATTCCCCTTCGCTAATACAAATTACCGGTTGCAGGGTTAAAAGCACTAACAACAACAACAACGTTCGACATGCG ACAATAACCTCAACCTCTTTTGTTCTCTCTCTTTCCCTCTCCTCATAACAACGTTATATTCATTACTCACACCATCAACTTGTCATTATGGGGAGGGACC CATCTCCTTTGGGTTCTCCTGAGGTTGAGGTTAAGATTCATCCACGCCGTGTCGCAAGCACCGTCCACCCCGGCCGTGGAACTTCTCCACCACTCTCTCC TCCGCCACATGTAACGGGAGACTCTCCGTTGCCACCGGTTAATCGTAATCATCATGAACGTGAACGTGCTCGTGAACGTGATCGTGACTTCAGCCTATTT AAACGGTGGTTCCCGTGGTTGGTACCGTCATTTGTGGTGGCGAATATTACTATATTCATTGTCACCATGTATGTTAATGATTGCCCTAGCCATTCATTTC CTTCCTCTTCTTGTGTTGCTCCTTTTCTTGGAAGATTCTCCTTTCAACCTCTCAGAGAGAATCCCCTCTTTGGTCCTTCTTCAATCACATTAGGCAAGAT GGGTGCTCTAGAAGTATATAAAGTGGTTCAAAAACACCAAGCTTGGCGCCTCCTCTCTTGTATTTGGTTGCATGGTGGGGTTGTCCATGTACTTGCCAAC ATGTTGAGTCTTGTTTTCATTGGAATTCGGCTTGAGCAAGAATTTGGATTTGTGAGGATTGGATTTCTGTATGTGATATCTGGTTTTGGAGGGAGTTTGC TATCTGCACTATTCATACAATCAAGTATCTCAGTTGGTGCTTCTGGTGCATTGTTTGGCTTGCTAGGAGGAATGCTATCCGAGCTCTTAATGAATTGGAC AATATATGCTAACAAGTGTGCTGCATTGCTGACTCTGATAGTTATTGTTGTGATCAATTTAGCTGTTGGAATCCTTCCACATGTGGACAATTTTGCTCAT ATTGGAGGATTTGTCTCTGGATTTCTTCTTGGATGTGTCTTTCTGATTCGGCCGCAATTTAAGTGGGTTAGCCAACAGAATTCTCCTCATGTACATGCTA TACAGCCTGTGAAATATAAGCACAAACCTTATCAGTATGTATTGTGGGTCATCTCTTTCATACTATTGCTTGCAGGATTGATTACGGGGCTAGTTTTACT CCTTCGAGGCGTTAACTTGAATGAGCGTTGCTCATGGTGTCATTACCTAAGTTGTGTTCCTACCTCAAAATGGAGCTGCAAAACAGAACAATTGTATTGT GAGACAACCCAAATTGGAAACCAACTTAACATAACATGCTTGAGCAATGGGAAAAGTGACATTTTCCCTCTGTTAGATACTGGCTCCTTGAAGACTCAAC AACTATGTTCTACACTTTGCAATTCATAACTACACATGCTCCAACATTTCATGAGGGAATGCCATTTAACATGTGTATATGATAGAAATGTCATTCTTTT GGATTAATTGACAACTATAGTTGTTACTATGTCCTATTATTCTTTTGTAACAGGAGAGGGGAGGAATGGAATTTGTATGTGGTCAATGAAACAATAATAA TTCTTAAAGATAGTAAATGTTGTAAAATGGATTTATCCATAGGACTATATGATAGTCCAATATGCATGCTTTAGATTTTAAGCCTAGGGTCATGCATATA GGTCAGTTCTTTTTGTGATAAAAATGTCTAACTTCACTAAGGCAAAGGAAGCTCCTTTGTTTTTCACATTTTCTAGTTTCTTCATATCTTACTACTACAG AGTTGGCTAAACTGAATTTTATAGCACCAAATTGATTATAAAGGAACAACTATATAGAAGTCTCAATAAGGTGAAGTTGATGTGTAAAGTTTCTATCCTT TGCATACTACACCTCACTGTTTCTTCACATTTCTGCAGTACAAGTAACATTTATATTAAGAGTATATCATATCGCCTGTCTTATTATATCGGGAATGATT TATATACATGTTGGGTTACTTCCTTTATAGCCAATTAGTTTTGAGATGAAACCTTAACATGATATCAGAG
• Tissue: flowers
• Gene name: LI_gene_39447;
• Additional information: details;

Expression of Ll_transcript_143079

FPKM

• FPAB: 0.5
• FPNAB: 0.1
• LF1: 10.5
• LF2: 20.1
• LF3: 16.2
• LF4: 8.8
• UF1: 9.8
• UF2: 19.7
• UF3: 11
• UF4: 4.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_143079

• Blastp: RHOMBOID-like protein 1 from Arabidopsis with 67.83% of identity
• Blastx: RHOMBOID-like protein 1 from Arabidopsis with 68.02% of identity
• Eggnog: rhomboid family(COG0705)
• Kegg: Link to kegg annotations (AT2G29050)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019447952.1)
• Pfam: Rhomboid family (PF01694.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;