| Id Trinity | FTRINITY_DN54074_c5_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_141763 |
| Sequence | CTAATATTGGGCCTTGAATAACATGAAGTAATAAAAATTGACCCACCATTTCAGTTCACACATTATCCTCTAAATTCATATGTCTGAATCAACAACATGC ATGAGTCACAGATTTCATTCTCTCCCAAACTGATAACAAACCAAACACTTTAGTCTTATGTGGTCTCTTAGGATCCACTCAGTTAACTCCAACTTCTTCT GTTCCTTCATCAACACTTTAATATATGTGACTCACAAAATTACACCCTTTCTTTTCATTATATTAAACATTGTTTCTTCTTTTTCTACCATATCTTACAA CTCAACTTCATTTCTGCCACTTTGATTCTTCTTAGAGTGAATTTCACTTCATTTCCCATCTGGGTTTTGTTGATTGGTATTGGAACTTCATTATTTTCTA TCTAACTTGTCACAATGATGTCATTGACAAGTAAAAGCATTGATTTTGTTGGGAAAAACTTGATTTTTGGTGGTTGTTGTTCTAATGGTTCTTTTGATAG TTACATAGTGAGGAATTATGGAAAGGTGAATGGAGGTAGTAAAATGGTTTGGTGCAAGAGGAGAAGCACCCAATGTGGTGTTTCTTCTGTTATGAAGATT GTAGAACCAACTTTGAATGGTGGAACTCAAGCAATTCAAGGCCTTAATGGATTGGACTTGAAAAGTTACTCCGGTGCCCCTATTTCTCCGGCTCAGTTAT TTGATGTGGTTGCTGATGATCTGAAAACACTCAATAAGAACCTCCAGTCGATTGTAGGTGCAGAGAATCCAGTTTTAATGTCGGCAGCTGAGCAGATATT TAGTGCTGGTGGGAAGAGAATGAGACCGGCTCTCGTGTTCTTGGTGTCAAGAGCAACAGCAGAGCTACTTGGCTTGAAGTAAGTACATAATAGTCTTCAG ATTCACTTCTCACATGCATGCACACAAAAGCTCTTCGCCTATTTTGAAAATTCTTTTCTTACGAGTTCTGACAATAGAAGTTGAATGCATTTTTTTCTTT CCAAATGTGTTACTCCAGCGAACTTACTGTAAAGCATCGACGTTTAGCAGAGATAATTGAAATGATTCATACTGCAAGTTTGATACATGATGATGTATTA GACGAGAGTGACCTACGAAGAGGTAAGCCTGTCATCCTTTCAATAATAATTTACTGACCTCACTTTAGATTTAGGATTACATGGCGTGCTTGACAAGGTG CATAGTATGAAGTAAATTTGCTCATACTATGAGGTTGTTTTGGTTTTAAGCTGGTATAACCATGTTACAATTTATTTGGTCTAGAATTTCCTTCACACCT CATGTTTGTGTCAACGCGGTGATGCTTATTCTTGCATTATGCTTGGATTTTGTTTCTAGAAAGTATTCAATCTAGTCCAGAAAAAAAGATTGCATTTGAC ATATCTCTACAAAGGGGAGAAAAAAAGATAACTGAAATAGATTTTGATATTGAAAGAGCGAAAAGTGTACTATTAGCAGCTTCTTCAGTTTTCTGCTGTA TTAGAGAGGACCACTAGCTATACATGTCGATGAAGAATAAAAAAGTCAATCTATGTCATTTTTGTTTGGCATCATCTGATTAATTAATCCCGCTAGAGTA TCCAACCACCAAAAAAGGAAATGACACAAAATGGACAAAAGAATAAGACTATACCTGACAACTAAAATCCGTGTACCATCAGTGCTTCATTATTATTGGT AGCGTGGACTATATCTCTCTAAGAAATTATAGCAGACCTAAAAAGCATGTCAGGAATCAAGTGCGAGTGAGTTAAGTCCAACAGCATCTAGGAGGAATAG GCAAAGTGAAGAGGAATATATAAGTTGTCGACCCATAAACCTAATATCTTAAGGCCTTTGGTTAAGATGTGATGCTTGGTGTACTTATGTGGTTCTTACC TAAAGCCCATTGTTGAAGTTTCCGTGGTTTTATGCTCCCCGTTTGATTGGTTGCTAGTGCCATTTTAAATAGAATTGAGAACGAGGAAAAACAGATTTTT CAATACATTTGGTTGCTCATTTGCGTCCCCGTCTGATTGTTTTCAGTGCCTTTTCGGGGAATTCAATTGAACAATGAAAAAAATCACTGGTTCTTCAAAT ATTCACATTGGATACACCGCAAATATATTGTTCTGGTTCCTGCTTAATATGTTAATGTTGTTACGCGTAGGCATTGGACTACCCTTAAGATAGCGTAGTT GAGAATTAATGAGTCTTTGTATGCATCATTACACAACCGAAGTAGATTTTAGGACAAAGCTATGTATAATCTTGTTAAGATTGTTGACTATTAGGTTGTG AAACGGCTTCTTTTGTTAGTTTCATAGTGTGAAACTCAATTTCATGGTTTTCTTCTTTTCTAAATCTGCTGGTTTCAGTTTCTCTTTATTTGAACTCAAT ATCATTGCTATGTATTTATAGGGAAGAAAACTGTTCATCAACTATTCGGCACAAGAGTGGCTGTGTTGGCCGGAGATTTCATGTTTGCACAGTCATCATG GTATCTAGCCAACCTTGAAAATATTGAAGTCATTAAACTTATCAGCCAGGTTATTAAAGATTTCGCGAGTGGTGAAATAAAGCAAGCTTCTAGCTTGTTT GATTGTGATGTCAAACTCGACGAGTATCTAATTAAGAGTTACTACAAGACGGCCTCCTTGATGGCTGCCAGTACAAAAGGAGCTGCAATTTTTAGCGGCG CAGACAACAGCCTCTCTGAGAAAATGTACGAATACGGAAAGAACCTTGGTCTATCCTTCCAAGTTGTGGATGACATATTAGATTTCACACAATCAGCCGA GCAGCTAGGAAAGCCTGCCGCCAGCGATCTTTCTAAAGGTAACCTGACCGCACCAGTAATCTTCGCATTGGAGAAAGAACCGAAATTGAGGGATATCATC GAGTCCGAATTTAGCGAGACCGGTTCCCTTGACGAGGCCATCGAATTGGTCAAGGGCTGTGGAGGCATTGAAAGGGCACAAGAGTTGGCAAAAGAGAAAG CTGATCTTGCTATTCAAAGTCTCCAATGCCTTCCTCAGAGTGTATTTCGTTTAGCTCTTCAGGATATGGTGGCTTACAATCTCCAAAGGATTGCTTAAGC TTGTGCATGCAATCACAAAATCAGAAAAAAAGCATTCTTTTGGTCTTAATATAAAGGATGATATTGAGAGTCTTGACATTTGAACTTGTATCATTGTCAA GAATTCTCAGCAAATCCTTTAAATGCTTCTCCCTGAGTTAGTTTTGGGTAGTAATATAGACACTGAAGAACAAAACAAACACACCCCATAATTTAATGTA TATTTGAAGATTCATGCAAAATTGAAGTACAAGGAAAATAATATTATTCCATTATTGTATCACAAAACTACATCATTCTTTGTCTCATTCTTCTTTTTCA CATATACTATAATGTGATAATTTTACAACTTTATAGTTTAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_39523; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_141763
| Blastp | Solanesyl diphosphate synthase 2, chloroplastic from Arabidopsis with 77.63% of identity |
|---|---|
| Blastx | Solanesyl diphosphate synthase 1 from Arabidopsis with 81.25% of identity |
| Eggnog | synthase(COG0142) |
| Kegg | Link to kegg annotations (AT1G17050) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019426033.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |