Ll_transcript_140872

• Id Trinity: FTRINITY_DN54089_c0_g1_i12
• Name Transcript: Ll_transcript_140872
• Sequence: AACCGTCCAAGTTTATCCTTCTTCTTCATTCTAAATTCATCTTTCTTCTTCTTCTTCTTCACATCATCTCCTTCATCTTCAATCTCGTTTTCCTTCTTCG TTCTTGCTCATCTATCTGTTCTTCTTCATTTTCTCACAAATCGTTTCTTCAATCACAAGAAACAACGAATTATGGATCAGATTCACAAAGCAACTCCTAC AATAATGAGTTGCAGAATCCTATAAATCCTTTCTTTCTGGATCCAGGAGATAATCCAGGATCCATTCTCGTTTCAACACCTCTGGATGGAACGAATTACA ACTCCTGCAGCAGAAGCATGAAATGTGCATTATTTTCCGAAAATAAGTTTAAATTTGTCAATGGAGCAATTTTACCTCCAAACTCTGATGATATAATGTT TGATGATTGGGAGAGATGTAATACCATGGTTATCCATGGATTACAAGGTGTTTGACAAAGCAAATAGCACAAAGCACGATTTATATTGAAAATGCACAAT TATTGTGGGAAGATCTAAAGGAGAGGTTCTCTAAGAGTGATTACTTTCACATGTCAGATTTGCTACAAGAATTGCATTCAAATAAGCAAGGTGAGAGAGA GATATCCAATTATTTCACTGATTTGAAAATAATTTGGGAAGATTTGAGAATTATTCCCTCATGCACTTGTGTTGTGAAATGCAAATGTAACATGTCAAAA TCAGTTAAAGAACAAAGAGAATCTGAGCATGTCATTTGTTTTTTGAAAGGATTGAATGATGATTTCAATAACACTAGATCTCAGATTTTATTGCTTGAAC CTTTACCTAATGTCAATAAGGTCTTCTCTCTGTTACAAAAACAAGAAAGACAATTGGCCAATGCTAGTACAAAAATTCTGTTTAATTCTAATCAAACAGA ACATATAGCTAGCACCAGGAACAACAGTACACAATGGAGAGGTGTTCTTGGCAGAGGATCCACATTTGTTAGCAACAATGGATCTATGAGTAGAGGTAGA GGTTTTGTTAGAAACTACAACTCCAACAGAAACAATAGTGTTAAAGTGTGCACTTATTGTGGGAGAGAAAGGCACACTGCTGATGTTTGTTACCATAAGC ATGGGTTTCCCCCTAATTTTGGCAAGCCAAGAATAAATAGTGGTGGTGCTGTGAACATTGCTGAAGTGAATGACTCTATTGACTCTAACAAACCTCATGA TGCTTCCAATAATGAGGGAGACACAAGTGCAACACTGAATTTCAGTCCTGCACAATATGCAGAACTTGCTGCATTACTGAAAAATATTGGCACCAACAAT GCTGTTGAACATAAGGTGAATCAGCTTAGTGTGATTGCTTCAAATCCTTCTGATGCTCACAAGGATTCAGGTAATATCCATCCATGGATACTTGACACTG GTGCTACTGACCATGTTTGCCCTCACTTATCTTGTTTTACCACTTACCAATCCATTAAGCCAATTGTGATTAAGCTGCCTAATGGAACAACTGTGACTGC AAACTACTCTGGCATGGTCATGTTTAATGAACACTTGATGCTGCACAATGTTCTTTTTGTGCCTGAATTCAAATACAATCTTATCTCTATTCATAAGCTT GTTCTTGCATTGCATTGCAGAGTTATTTTTGATGCTTCTGAATGTATGATTCAGGATATGCTTACATTGAAGATGATTGGACATGCTAAGGTGCATCACA GTTTGTATGTCTTGATGGAGCCTGCCAAGTGTGATTCTGTGAAGATTTGCCTCACTAGTTCTGTTCCTAGTGTTGCAGCCTTTGATTTGTGGCATTTTCG TTTAGGACACCCTTCCAATGCAGTTTTACATACCATTTGTAAAGAATTCTCTTATGTTCATTTTGATGCCAAGAGAACTTGTGATACTTGTCATTTGGCT AAACAGACCAAACTTCCTTTTGCAAACAGTTTGAATAAAAGTTTAGCACCATTTGATTTAGTGCATATGGATATTTGGGGTC
• Tissue: flowers
• Gene name: LI_gene_39657;
• Additional information: details;

Expression of Ll_transcript_140872

FPKM

• FPAB: 0
• FPNAB: 0
• LF1: 0.7
• LF2: 0.6
• LF3: 0.2
• LF4: 0.2
• UF1: 0.8
• UF2: 0.7
• UF3: 0.3
• UF4: 0.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_140872

• Blastp: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 23.49% of identity
• Blastx: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 25.7% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019450585.1)
• Pfam: GAG-pre-integrase domain (PF13976.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;