Ll_transcript_140847

• Id Trinity: FTRINITY_DN54089_c0_g3_i1
• Name Transcript: Ll_transcript_140847
• Sequence: TTCAAATATGATCCATACAAAATCCAATATGGTATCAGAGCAAAATGCTCTGAATACCGCTGCAACCTCTGATAACTGATGATAACCACTTCTTATCTTC TATTCTTTCTTCAATCATTCATTTCTCACAAAGTTCTTCAACTTCTTCCAATTTCTCTCTGAAATTCTCATAAGCATCATTACAAAGGCAGATTATGTTT CAAAAACGCAAGACCACGATCCTCATATCTCTGTTTATAACAATGAGATTCAATCACAAAACCCAGGGAGTCCATATTATTTGCATCCCCGGGAGAATCC TGGAGCGATTCTTGTGTCAACAACACTTGATGGATCAAATTACCAATCCTGGAGCAGAACTATGAGGCGTGCATTAGGATAAAAGAATAAATACAAATTT GTCAATGGTTCAATTCCAGTACCCAATCATTTGGATCCGACTTTGATGTTTGGGAGAGATGGATTATAAGATATTTATCTACACAAATTGCACAAAGTGC AGTGTACACTGATAATGCTCAAGATCTATGGGAAGATTTGAAGGAAAGGTTTTCCAAAGGTGATCATTTTCGAATTTCCGATTTATTACAAGAATTGCGT TCAATTAAAAAGGTGAAAGAAACATTTCAAGTTACTTCACTGATTTGAAAACTGTTTGGGAAAATTTGGAGTCATTAAGGCCACTTCCATCATGCACTTG CCTCATCAAATGTAAGTGTGATGCTATGAAAATAATAAGGAACTATAGAGAATCAGAATATGTAGTGTGTTTCTTGAAAGGATATAATGATGATTTTAAT GTAACAAAGACTCAAATTTTATTGATGGAGCCATTGCCTACTATAAACAAAGTATTTCAACTGTTATTACAACAAGAAAGACAAATTGGTGATTCTAGCA CCAAAATTCTGTTTAATTCGAATGAGTCAAAAACTCAACAGAACAATAGTTCATTACAGCAATGGAAAGGCTACAGAGGAAACACACATGGTAGAAACAA CAATAACTATCAAGGTAGAGGAAAAGGCTTTGGTAGAGGATATGGTGCAGGGAGGAATAATAACACTAAGGTTTGCATCTTTTGTGGTAAGGAAAGACAT ATTGCAGATGTTTGTTATTATAAACACGGTTTTCCTCCTAACTTTGGGATGTAGAGGTCCAAATCATATGGAAGTAGTAATCATAATACAAGTGCCAACA TTGCATCAGTCGGAAATCATGATGAAGCACAAACAGAAACCTTGTCTCAACCTATTCTCAATTTCAGTCCAGTCCAATATGCAAAACTGATATCATTGAT GAACAATTCTGCACAGCCCAATTCTGCACAATCCAATTCTGCACAGTCTAATTCTACACAGTTGCCCTTAACTCATAAAATTAACCAGCTCAACATCATG CCAATTGATGAAAATGATGCTAATATGACACTGGACAAAACACAAGTAATATTTACCCTTGGGTTCTTGCTACTGGTACTACTGGTTATGTATGCCCACA CTTATGTAGTTTTGTTACCTATCATTCAATCAAGCCAGTCATTATTAAGCTGCCTAATGAATCAGTTGTTAAAGCCAACCATTTTGGGATGGTTGTGTTT TTTGAGTCCTTAATCTTACACAATGTTCTATTTGCTCCTGAGTTCAAATTCAATCTTATCTCTGTTAATAGACTAGCAAAAGGATTAAATTGCAGAATGA TTTTTGACAAATCTCAATGCATGATTCAGGATATGAGTACCTTGAAGATGATTGGACATGCTAAAATGCAAAGGAATCTCTACATTCTAACTGCTCCCTC AAGATCATTGTTGAAAGCAAACTGTTTTGTTAATTCAATAGTTAATGTACCAGTTTTTGATTTGTGGCATTTTAGATTGGGTCATCCTTCATTTTCTGTA TTGCAAAACATGTGTAAAGACTTTGCTTATGTTCATTTTGATTCACACAAGATCTGTGATCTTTGTCACATAGCTAAACAAACAAAGTTGCCATTCCCAA ATAAAATGCATAGATGTTCTGAACCATTTGATCTCATGCACATGGATATTTGGGGTCCTTTGTCAATCTCTTCTATACATGG
• Tissue: flowers
• Gene name: LI_gene_39659;
• Additional information: details;

Expression of Ll_transcript_140847

FPKM

• FPAB: 0
• FPNAB: 0
• LF1: 0.2
• LF2: 0.5
• LF3: 0.9
• LF4: 0.1
• UF1: 0
• UF2: 0.9
• UF3: 0.1
• UF4: 0.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_140847

• Blastp: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 36% of identity
• Blastx: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 25.23% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019459936.1)
• Pfam: GAG-pre-integrase domain (PF13976.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;