Id Trinity | FTRINITY_DN54099_c1_g1_i1 |
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Name Transcript | Ll_transcript_142608 |
Sequence | AGAACACTCAAACATAACAATGAATAAAATATTTAAAAACAAAACCATTTATTCACTCTGTATACCTTTTTCTTCTTCATTTCTCAACATCTCTATCCAA ATTCGCTTTCTCCATTGCTTTTCCACTTCTCTGAATTCAACTTATTTAAATCAAAACAAAAAAAAGAATAATCACAAAACATGTCAATGAAAAAGAAGGG AACGAATTCAAGAGAAGCATTAGAAGGTGCAGTGAAATCAATAGGGTTAGGTTTTGATCTATGCAACGCTCTTAGACTCAGACACTGCAAGAATTACTCA CGTGACTCTAGGTTGATTTCTATCGACGATGATCACGTGCGTAATCTTGATCTACCAGGTTCACTTTCAATTTCAAATGTTCCCAAATCTATTAAGTGTG ATAAAGGTGACCGTACTAGATTATGCTCCGATGTTCTCTCTTTTCAGCAGATGTCGGAGCATTTCAACCAAGACCTCTCACTTTCTGGTAAGATTCCAAC AGGCCATTTCAATGATGCGTTTGAGTTTTCAGGAATTTGGCAGAAAGATGCAGCAAGTACCAAAAGTCTCGCTTTTGATGGTGTCTCCATAACACTATAC GATGTAGCACTTGATAAAACCCAGGTTGTTCTTCGTGATTATGTCAAACAAGCTGTTCCCTCATCATGGGATCCTGCTGCATTGGCGAGGTTCATTGAGA AGTATGGAACCCATGTTATAGTTGGGGTGAAAATCGGGGGAACCGATATAGTATATGCAAAGCAGCAGTACTCTTCTCCCCTGCAACCTGCTGATGTGCA GAAAAAATTGAAGGACATGGCAGATAGATTCTTCATTGATGGAGCTGGACAAAATAACACAAATGATCGGAGATTTAATGGAAAGCTAAAGGTTTGAAGC TTTCGATTTCGGATTTATTGTTCATCTCTTTCTCTTTTTTGGATTGAAATAGTGATCATTTCCATAAAGTGAACTGTAAGTCTGTAAAAGCTATCAAAAT ATTGAAAACATAACAAGTCTATTTTCAGATGATATTGATGAGCCCAAGTTCGACTTGTAGATTGTAAAGTATGTTAAATATCAAACAACAAATAACAAGA TATTTTCTGATCTTTAATAAAAAGGATGAGAGTCCTTCTCTACTGGAAGTGTATATTGCTGGTAAAGCAATTGAGTTGTTTGGTAATAAAATACTGTCAT TCCATGTTATGGGATAAATTCTGGAAATCTTGGATTTCAACTTCATACATTACAGATGGTGGTATAGAAGTAATTTGAAGTCCATTTCATATTCTTTAGT AGTGTTTTTGAAAAACGGGAGCGAAAATTGCTACTAGAACATGCTTTCGGCTTTCCGTGTATAGGTAGACCTCTTTTGTAATTTTGTGTGTAGTAAAACT ATTCCACATTTCCACTCAGCAACTTTTGTATGCTTCTTCTTTTATTTACTTAAATTACTACGTACGGCCATTTTAACTCATCATTTTCTCTTCCCCTCCT CTTTTTCCTCAGTTTATGAAGGACAATGAGCTAGGTTTCGTGGACATCCAAACTCGTTCCTACTCCGAATTAGAGGTAAAAACATTTTCATTTTTAAATG AATTTATGGCAGATTCAGGATTCTTCTTGTTATTAGTATTTGCTTTACTGGGAGCAGCACTACCTGGTTTCTTTTTCATGCTTCTATTATATAAATTGTT GTGCAGCATGCTGACAGAGTGTCAGGTGATATGATTGTCTGTCATGGTTTATTTTTGACAAGTTTCTAGGTTTTCTAACTCACTGTAACATCATTCTTAT TGTTTCTTTTCTTGCTCGATCAGCCATTAATATAACCTTGCGTTCTATCATTCTATCCATATAAGTCTAAGTTAATTAAATAGAAGAAACAAAATTAAAT TCTTCCACTTATTTTTTTTTCTTTTGTTTAAAATCTTTAGGTGCAGGATATCAAGTTCATGTGCAAGAGAAAAGGTGGAAGTGGGAAAAATGACCTAACC CATAATGAATGGTGCCAAACTGTTTTGTCTCAACCTGATGTGATTTCAATTTCATTCATGCCAATTATATCTCTACTTAATGGAATCAATGGGAGTGGAT TTTTAACTCATGCCATAAATCTATATCTTCGATGTAAGCAAGACATCTTTAGTCATTTATTTGCATTTGGCCCTAAAACCAATTGACCTATTCTAATTCT ATTGCAGTGAAGATTGTTTAAGATTAACTGTAAGCTATATATTTTGGTTTATTAGGAAACCATGACCTCTTGGTTTAGAAACATGTCATGTGAGTAATCA AATAAAATTTACTAAAAAGTGGAGTACAGGTGATGAACACTATTAACATTAGATAGTCTTACGGTAGTGAGGACTGAGGATGTCTCCAGTCTTTAAATGG AATTTATAACTTTGAACCCTCATTAGTGGTGCTAATTGACTGGTGATATCAAGTTAGTAACTATGAAGACATCAACCATAGATGTTGTCATGTTGCTTCT ACTACCATTATTTTACCATGCTCATTCAGATAAAAGTATTATTTTAGTTAATACTTTTCAGGCTTCTGGAGTTTTTGCTTGTATAATCTAACATTCAGCA TTGCATGATAAAGAGATTCTATTATGTTCTTAATCAGTTGTTATAATTTTTGTGTTTGTTTGTCATCCATGTTTAAAAGATGGTGTGGGTCATATTTATG TGTACCGTTATTTAAAATAATTTTGTGTTATTTTATTCTATAATTGATATATTAAATGAAAATAAACCAACAAGTTACTTTCTATTATTCATTCCAGTCC TTCGGAATGGGTGGGACAGTGGTGTTGGAGACATCAAACTTGTCATGGGCAAACATTATAGCTTAAGCATTTAGGAGGGCCTTCAACATGGTATTAAAAC CGATATGATAAATTTGTCAAGAGTTCCATCTCTGTAATAGGTTAATGTAACTGAAGGCGGCCACTATATGAAGTTAATTCAAAGCATATGCAATTCTCAA TCCATGCATACCTGAAGTTATGAAAAAACATGTCTGTAGTAAATTATAATTACCATCCTTTTAAACAAGAAGAAAATATAACCACCATACAATATCTTCG GACTGCAGATAAACCACCAGTTGGAGAACTGCATCAATTTTTAGAGTTCCAGATACCAAGGCAGTGGGCGCCTGTATTTGGCGATCTTGCCCTTGGTCCT GACAGGAAGCTACAGAGTAAAACATCTTTGCAGTTCAGTTTTATGGGTCCTAAGCTTTATGTAAATACAACACTGATTGATGTGGGGAAGAGCCCTGTGA CGGGCCTCCGGTTGTATTTGGAAGGAAAGAGAAGCAACCAATTGGCAATCCATTTGCAGCACCTTTCCTCCATTCCCAAGACCTTTCAAATTCAGGATGA GCTGGATGGAAATGTGTCTGACGCCACTTCAGAACGCAGTTACTATGAGAAGGTGCAGTGGAAGAGTTTCTCTCATGTTTGCACAGCCCCGGTTGAATCT TACGATGACTACTCAGTTGTGACTGGGGCTCATTTTGAAGTTGGAGATTCTGGCATGAAGAAAGTTCTATTTCTAAGACTTCGTTTCTCTAAAGTTGTCG GTGCAATTCGTGTCAAAGCTCCCGAGTGGGATGGTTCTCCTGGCTTGACCCAGAAATCCGGAATAGTCTCAACTTTGATCAGCACCCGCTTCTCATCTGC TGCACAAAAACCACCACCACGCCCATCTGATGTAAACATCAACTCTGCGTTATACCCCGATGGACCTCCCGTATCAACACACACACCTAAACTTCTGAAG TTTGTTGACACAACAGAAATGACAAGAGGACCACAAGACTCTCCAGGCTACTGGGTTGTGTCTGGAGCACGGCTTTTGGCCGAGAAGGGTAAAATATCAC TCAAAGTAAAATATTCCCTTTTAACTGTGATTCCACCTGATGAAGAGGCACTAAGTTATTGAAAATACCACATGAGATGGGTGTATATATGATAGTGTGT CTGATTTGTACATCTGCTCTATTCATTTTAGGTTACTAGTTGATAGATATTGCCATTATTTGTGTGTCCTTTACAGTGCAGATCTCTTGGGAGAAATTCC ATTATGTGGTTCTTGGAAAAGCTTGTATGATCATGCCCATTATGCCTTTTTGTGTGTATCATTGTATGTGTTTCCATTATGTTAGTGGCTTGGTTATGCA GTAACTATCAATGTTCTGCTCTCAAAAAATGAATGCATTGAGCTGGGAAGTGATCTTTCAATGGGGATTTGGGAAGTGGGAACCACATTAATGTCTTTG BLAST |
Tissue | flowers |
Gene name | LI_gene_39736; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_142608
Blastp | MACPF domain-containing protein At4g24290 from Arabidopsis with 70.77% of identity |
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Blastx | MACPF domain-containing protein At4g24290 from Arabidopsis with 70.77% of identity |
Eggnog | MAC/Perforin domain(ENOG410Y9MJ) |
Kegg | Link to kegg annotations (AT4G24290) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019416771.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |