| Id Trinity | FTRINITY_DN54104_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_43274 |
| Sequence | CAACAAAACAAAGAGTTCAATACGACACTACCTTTCTAATTTCATTTTCTCTTTGATTTCTCTTCTTAAATTACCGTTACAGTGTTACTGTTACGACGGA ATCACAAGCGTTGGCGACTTCAAAACCCTAGCAATCTTCCACCGCTTTTTATTCGCTCACACTTTGAACCTATTTTCATGGTTCACAAATATCTTGCGAG CGCAATTGACTTTGCTGTCAAAGGGAATTTGAAATTGGAAAAGCTAGCTTTCAGCTGGCTTTTGTGCTAGTTGAGGAATAGTGCCTTCTGTCTATATCAG ATGGCTGAAGACAGCCTGTGCGGTGGTGGGTTTTCAGCTGGTCTGGCGTTGATATTGGATAGCAATGATAGTAAAAAGAATTTGTCGAAAGCTAGACTTC TTTCTTCTTGTGATGATATGGGTCAACAATCCATGGAGAGAACCCTTGAATATGTTTTTGGCCTCCCCAACAGGTCGCTCAATCCATTGAGTGGTCCAAT CGACCACAACTTAATTCACACTGTCATAAGGAATGATTTCTCGAGATATAATGTGAAATTTGGTGATTCATTTAATGAAAGAGATGAAATTGGTGTTGGT AAAAAAGGCAGTGGGTCTGATGTTGTAGGCTTAGACAAATGCAGTATCTGTGGTGATATTAAAATCATCAAGTCACCATTTTTTATAGAGAGCTTGGCAA TGTTCAGTAGTGCCAGGGCTAATGCTTGTGTTTGGCAAGGAAAATGGATGTATGAAGTTATGTTAGAAACATCTGGTATACAGCAGCTTGGTTGGGCCAC TATTTCTTGCCCTTTCACTGACCATAAAGGTGTTGGTGATACTGATGATTCATATGCATATGATGGGAGAAGAGTTAGCAAGTGGAACAAGGACGCAGAG CCCTATGGTCAGTCATGGGTTGCTGGAGATGTTATCGGATGTTGCATAGATTTAGATCGCAATGAAATACTATTTTACAGGAATGGGAATTCACTTGGGG TGGCATTTCGTGGAATTCAAAAAATGGGTCCTGGTTTTGGTTATTATCCTGCAATTTCTCTCTCCCAGGGTGAAAAATGTGATTTGAACTTTGGGGCCAG ACCCTTTAAGTATCCCATTGAAGGCTACCTTCCTCTTCAGGCACCTCCCTCTAAAAGCTACTTTGTCACCCGGTTGCTGCAATGCTGGTCAAGGCTGTTG GACATGCATTCAGTGGGACGGGCCGAACATTCTTTAGTTCAGAAATTGAGAAGAGTGAGGAGGTTTGATTCATTAGAAGAAATTTTCCATCCCGCCTCCT ATGCAATATGTGAGGAATTATTCTCTATTCTGGAAGCAGATGTTGGGAACATAGAGTATATGGTTTGGGGTCCATTTTTATCTTTCATGTTTGAAGTTTT TGAATTGCATGCACCCCATGATTATTCAAGCTTGGATAAAATGGTTGGAGCACTGCTACAATTTCAAGGATCACACATGCTATTTGAACACATCATAAAT GCTCTTTCCTGTGGTTGCAAAACAGCCTCATTAGTTCTATCTGAATGTCCTTACTCAGGATCATATTCTCATCTTTCGTTGGCATGTCATCTATTAAGAC GAGAGGAACTTATGGTGCTTTGGTGGAAGTCACCAGATTTTGAATTCTTGTTTGAAGGTTTTCTATCACAAAAGACTCCGAACAAGCAGGATCTTGACTC CATGATACCAACTGTTTGGTGGCCTGGTTCATTTGAAGATGTGTCCTGTGAAGGTAACATGATATTGACAACCACGGCTTTGTCTGAATCAATCAGCAAG ATTGAGGAGAAGCATAGGGCCCTTTGCCGTTTGGTGATACAATTTATACCACCGACAGCACCTCCCCAGTTACCCGGAGCAGTGTTCCGAACATTTTTAC AAAGCCTTCTGCTGAAGAACAGAGGAGCAGAACGAAATGTCCCACCTCCTGGAGTTTCTAGCAATTCGGTTCTTGTTTCAATTTATTCAGTTGTACTCCA TTTTCTATCTGAAGGATTTGCCTTGGGTGATATCTGTGGCTGGTTAAATAGCTGCAAAGCGGATGTTGGTTTCCTTCACAGAGGTGGTCAACAAGGTTTT CCTGTACAATTGTTTCTAAAAAATGATCCCCATAGAACTGATAATTCCAGGCTTGGAGGATCGTATACCCATTTATTAAAGCTACACCCTGCAATTGATC ATGAAATGGAAGTGGTTCTATGGGATGAAGGTTGCATGGATAGTGAAGAAACCAGAGTAACTCATTCTACCAGGCAGAAGCCATGCTGTTGTTCTAGCTA TGACTCTGGTTTCACAAGAAACTTGAAGATTCCAGCTAAATTTATGGCCAAAGGTTCCAAGGGTCATTGTAGCTCTATTCCAGAAAGACCTGCTCATGTT GCTTCCGAATGCAGTGATGAGAATTTGAATGATGAGATAACAGATAAACCTAGCTCCGGCAATCAATCTGAACCTGAGTATGGTTACCGCCACATGCACC ATATGAAATCTATACCGAAGGATACTAATATAATTATAGCTATGCTGCAAGAAGAAGAACTACTCGATGCTTTGCTGTGGTTGTATCATGTTGGTCTTGC TCCGAATTTTAAGCAGGTGAGATCATGCTAGCAAAATATAATTGTAGTATAGCAATTTTTGGTGATGAAGGACTTGAGTTTATTTGAAATGCTGAGCTTT TTATCAAAGACTGAGAAAGAAAATGTAAAGGTGGTGCACAAGCCTTATATATCTCAGTCCCCAATTCAAGAATCACTAGTTATGCTCTGCTGAGGTTAAT TTCTTCATAGGTCAATAACCACAACCAATATTATTCAAAACGGATTTAAAGCTAAGTTTCTGACTTGGAGTCTTACCTTAGATTAAATTACTTTGACCTA CCTACCTTGCAGTTTGCCTAAAGTACACTTACATACCCTTTTGTTTGGTCATGACTAATTCATTCATTGTCTTTTGTTTTTCACCTGTATGGTGTGATAT ATCTGCCTATCTTGAAAGAATTTAAAAATGATAGTTGCTGTTTGAGAATTCATAGCAGTGGAGGCCACTCAGTGTAATATACTAATTCCTGAAACTATAG GCGATGTTGATGAAATTCAAGAACCTGCAGGGGTATCTCTATAACCTTCTGTTGACTTTTTTAAATTATTATCTTCATGACTATTATTTCAAATTCAATT CACTAGCGTAAACCTAGTCAGTTAAATAAATTTATACAAAATTTATTTTTATCAATCCAACCATTAAGTCATTAGTAACTGTAATGTAGATCTTGTCAAA TTTTAGAAAATTAGAAGAGCAGTAGGTATGCATTCAATGATTCACATATCTGTTTATTTTAAATATTTTCCTATGTTAATTTTATGACCTTTCAAATAGT TGTGAAACAATTTTTTATAATTGTAAAAGCTTATTAACATGATATGCCTGACATAAAGCCATAAATTTTCCATCTAACGTTGAATTTTATGATACATGCT TTGTATAAAAGTTATTCGCAGTTTAAATTTGATTTTGATTTACACTGGAGCCAACAGATCCTAACCCTGTTGTAATAAAATCTTCTTTTGCCCTGGACTT CTTTCTACTTTGTACATCCTCCTCATGTTGACTGGTGTAATTTTTGAAAGTTCCAATCACTTGATTTTTAATGTTAAAATTATAGTGAAAAGATGGAAAA AATCAATGAATAGTTTTTTTTGCAGGCATCATACTACATGAATCATCAGGCACAGTCAATATCCCTCTTGGAGGAAACTGATAAGCAAATAAGAGAAGGG GATTACAGCGAGAAATTGAAGCATTTGAAAGAAACTCGTAGTGAACGTAGAGAAGAGGTTATTGATTGTGTCAGGCACTGTGCTTGGTATCGTATCTCTC TATTTTCTCCATGGAAGCAGAGAGGAATGTACGCAATGTGCATATGGGTTGTGCAGTTGTTGCTGGTTCTTAGCAATATGGATTCGGTGTTTGTCTTCAT CCCTGAATATTACCTGGAAGCTCTGGTTGATTGCTTTCATGTGTTGCGGAAAAGTGATCCTCCATTTGTTTCATCTACAGTTCTCATCAAGCGGGGTCTT GCTTCATTTGTTACCTTTGTTGTTACCCATTTCAACGATCCAAGAATATCAAGAGCAGATCTTAGGGATCTTCTTCTTCAGTCTATATCTGTCCTGGTGC AATACAGGGAGTATTTGGAAGCTTTTGAGAGGAATGAGGCAGCTACCCAGAGGATGCCAAAAGCTTTACTATCAGCATTTGATAACAGATCTTGGATCAC AGTAACAAACATAATCTTGCGATTATGCAAGGGATCTGGTTTTAGTTTTTCAAAGAATGGAGAATCATCTTCATCATCAGTTCTTTTCCATCGGTTGCTT AAAGAAGCTTGCATAAATGATAAAGGGTTATTTTCATCTTTTCTGAATCGTGTATTCAATACACTTAGCTGGACCATGACTGAATTTTCAGTTTATGTTC GAGAGATGCAAGAAAAGTACCAGGTAATGGAGTTTCAGCAAAGGAAATGCTCTGTCATATTTGATCTTTCATGTAATCTTGCAAGGATTCTAGAGTTCTG CACTCATGAGATTCCCCAAGCATTCTTGTCTGGATCCGACACAAACCTACGGAGGCTGACTGAGTTGATTGTATTTATATTAAATCACATTACTTCTGCA GCCAGTGCTGAATTTATTGACTTGTCTCTTAGACAGCATAGCCAATCTTCAGAGAAAGTAAATCGAGGCATGATATTGGCACCTCTCACAGGGATCATCA TAAATTTATTGGATGCTACTCATCTGGAAGAATATCGAGAGAAGAATGATCTTTTGGATGTTTTTATGACCATGGACTGTCCAGATACTGTCCATTATGG ATTCCAGAATCTTCTGGATTATATCTGTGATGGATCTTTTCACGGGCAAGCTTTAGCAGCAAAATATGAGCAGCTAGAGAACTTTCACAGCCTCCTTACT TTCCGTGCCACGATCCAACACAATAAAGTGGATGACGCGGCAGATACCATTCCTGATGATAGCTTGTGCTGCATAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_39776; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_43274
| Blastp | E3 ubiquitin-protein ligase RKP from Arabidopsis with 60.95% of identity |
|---|---|
| Blastx | E3 ubiquitin-protein ligase RKP from Arabidopsis with 60.95% of identity |
| Eggnog | RING finger protein 123(ENOG410XQ4V) |
| Kegg | Link to kegg annotations (AT2G22010) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019415400.1) |
| Pfam | SPRY domain (PF00622.27) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |