Ll_transcript_43278

Id TrinityFTRINITY_DN54104_c0_g1_i5
Name TranscriptLl_transcript_43278
SequenceTATTCACCTTACACACATCATCGTGAATGAAAGGCCAACCGTCGAGTCTTACATTAATTATTAACGAAATTAGTTATCGCCGCCACCATTCAGCATCCGG TAGTTTCAATCCCCCAAATCGACACGTGTCAGTTGCATCCTCATTTCCTTGCACCTACACACTTCTTTTTTCTTCATTTTCTCCAAACTTATGGCACATC ATAATATAACCATGATGATTAAAACATAGTATATACTTAATTATTCCAAACTCTCTCATTTCATATTCTATCCACTATTTAATATTTACTGTTCATAATT ATTAATTATGTAATATTTAGGTACACGTGGTATTTACTATTATATGTTATTCCTAAGTTTCAATGGTTCCTGCAAAACCCTAGCCACCTTCCTTTTGTTC ATACATGAACCCCATCTATTGTTAGTGCTCAGCAATGTCAAATATTCACATTCTTTTGGATGTTCCCGACTCGGACAAAATTATCTCCAGTGCGACGATA ACTGTGTGAAAAAGAAGTTCAACATTCTGTATAGTCACTTATTTCAATTTTAATTTATTTTCCTTTTTTTTATAACAAAAGTGATGAGAAGGTTGATGTG TTGTTTTACTTCTTAGTGGGAGAAATTGGACCCCGGGATAGGTAATTGTTGATGCAATGACAAAGAGCATTTTACAACTATGTGGGCTCAACTATATGGA TCAAACAGTGTTATAATGTTTTATTGAATTTTGCTCGCAAAGCAATGCTTTTATGCCAGAGATTCCTCCAAAGTTTCAAGTTTACATGGTTCATGAGTTG TTCTGAGCACAATTGATTTTGTGGTTGTTGGTCGAAGGGGATTTGAAATTGGAAAATCGTTCAGCTGGGTGCAGGTTGGTTGAAGGGGTAGTGCCTTTTG CGTCGCAGATGGGTGAAGACAGCTTTCGTGTTGGCGGGTTTTCAGCTGGTCTGGCTGTGATCTTGAAAGATGAGGAGAGAAAGGAAAATTCACGACTTCT TTCTTGTTGTGATGATTCAAGTCACCAATCTGTGGAGCGAACCCTCGAATACGTGTTTGCCCTTCCCAATAGATCACTCAATCCAGTGACTGGTTCAATT GACAGCAAATTTATTCGCTCTGTCATTAGGAATGATTTCTCTAAGTTTAATTCGAAATCCAGTGATTCATATGATCAAAGAGATGGAACTTTTGTTAGAG GTGGTTGTGGAAATAATGTTGTAGGCCTGGAAAGTTCCAGTATCCGCGGTGATATTGGAATTGTGAAGCAGCGCCCATTGCTTGTAGAGAGCATGTCAAA TTTCAGTAGTGTGAGGGCCAACACTTGTGTTTGGAAAGGAAAATGGATGTATGAAGTTGTGTTAGAGACATCAGGTATACAGCAGCTCGGTTGGGCTACT CTTTATTGCCCTTTCACCGATGATAGAGGTGTTGGTGATGCTGATGATTCATATGCATACGATGGGAGGAGAGTTAGCAAGTGGAACAAGGATTCCGAGA AGTATGGCCAGTCATGGTTTGTTGGTGATGTCATTGGATGTTGCATAGATTTAGATCGCGATGAAATTCTATTCTTCAGGAATGGTAATTCACTTGGGGT GGCATTTCGGGGGATTCGAAAAATGGCTCCTCCTTTGGGATATTATCCAGCAATTTCTCTCTGCCACGGTGAAAGATGTCAATTGAACTTTGGGGCTCGT CCCTTTAAGTATCCAATTGACGGTTATTTTCCTCTCCAGGCTCCTCCATCTAAGAGCTATTATGTCACCCAGTTGCTGCAATGCTGGTCAAGGCTGTTGG ACATGCATTCAGTGGAACGGGCTGAGTATTCTTTAGTCCAAAAGTTGAGAAGAGTGAAGAGGTTTATTTCATTAGAAGAATTTTTTCATCCTGTTTCTCG TGCAATAGCTAAGGAATTATTCTCTGTATTTGGAGCAGATGCCAGGAGCCAAGAGTATATGGTTTGGGGTCCTTTGTTGTCTTTCATGTTTGAAGTTTTT GGATTGCATGAACCCCATGATTATTCAAGCTTGGATCAAGTTGTTGATATGCTGCTACGATTTAAGGGATCACATTTGCTGTTTGAGCACATCATAAATG CCCTTTCCTGTGGTTGTAAAGTAGCCCCATTTGTTCTAACTGAATGTCCATACTCTGGGTCATATTCCCACCTTGCATTGACATGTCACCTACTTAGACG AGAAGAACTTATGGTGCTTTGGTGGAAGTCACCATATTTTGAATTCATGTTTGAAGGTTTTCTGTCACAAAAGAATCCAAACAAAGAGGATCTGGAGTCC ATGATACCAACTGTTTGGTGGCCTGGTTCATGTGAAGATGCAACTTATGAAGCTAACATGATGTTGACAACTACAGCTCTATCTGAAACAATCAGCAAGA TCGAGGAGAAGCACAGGGATCTTTGCCGCTTAGTGATACAATTTATACCACCTTCAACATCTCCCCAGTTGCCTGGGGCAGTGTTTAGGGCATTTTTACG AAACTTTCTACTGAAGAACGGAGGAGCAGACCGAGATATCCCACCCCCTGGAGTTTCTAGTAACTCAGTTTTTGTTTCAATTTACACAGTTGTACTTCAT TTTTTATCTGAAGGATTTGACTTGGGTGACATCTGTGGCTGTTCAGAGAGCTGCAAAGCAGGCTTACTTCATAGAGGTGGTCTACGAAGTTTTCCTGTAA GGTTGTTTCTGAAAAACGATTCTCTTGGAACTGATATTCCCAGGCTTGGAGGCTCCTATGCTCGTTTATCAAAGCTACACCCTATACTTCATCATGAAAT GGAAGTGATTCAATGGTATGAAGGCTGCATGGATGATGTAGAAACCAGAGTTACGCATTCAACCAGGCAGAAGCCATGCTGTTGCTCTAGTTATGACTCT GATTTTGCAGGAAACTTGAAGAATCCAGTCAAATACAGGGCCAAGGGTTCTCGCAGCCATTGTAGCTCTATTCCAGAAAGATCTGCTCATGTAACTCCTG AATGCATTGATAGGAGTTTGGAAGATGAGATAACAAATAAACCTAGCTCCAGTGATCAATCTGAACCTAGTTGTGGTCATCACCAGGTGCATCATATGAA GACTTTACCTAAGGATAGTGCTTTGTCTAAAGCTACACTACTAGAAGAAGAGCTACTTGACGTCTTACTGTGGTTGTATAAATATGGTCTTGCATCAAAT TTCAAGAATGCATCATACTACATGACTCATCAGGCACAGACAATCTTGTGTTTGGAGGAAACTGATAAGCAAATAAGAGAAAGATCTTGTAGCGAGAAAT TGAAGCATTTGAAAGAATCTCGGAATGAATATAGAGAGCAGGTTATTGATTGTGTCAGGCGTTGTGCTTGGTATCGTGTATCTTTATTTGCACGATGGAA GCAGAGAGGAATGTTTGCCATGTGCATGTGGGTGGTCCAGATGCTTCTAATTCTGAGCAATATGGATTCGGTGTTTATCTATGTCCCTGAATACTATTTG GAAGCTCTGGTTGATTGCTTTCATGTGTTGAGGAAAAGTGATCCACCATTTGTTCCATCCACATTTTTCATCAAGCAAGGACTTACTTCATTTGTCACCT TTATAGCTACTCATTTCGATGATCCAAGAATATCAAGTACGGATCTCAGGGATCTTCTTCTTCAGTCTATATCTACCCTGGTTCAGTACAGGGAGTATTT GGTTGCTTTTGAAAGCAATGTTGCAGCCACTCGAAGGATGCCAAAAGCATTATTATCAGCATTTGATACCAGATCTTGGATCTCAGTGACAAACATACTT GTGCAATTCTGCAAGGGTTCTGGTTTTTCGAAGAATGGAGAATCATCTTCCTCATCAGTTATTTTCCAAAGGTTGCTAAAAGAAGTATGTATGAACAACG AGGGATTGTTTTCAGATTTTCTAAACCGTTTATTTAATACACTTAGCTGGACAATGACTGAGTTTTCGGTTTCCATTCGAGAAATGCAAGAAAAATACCA GGCAGTAGAGCTTCAGCAAAGGAAGCGATGTGTTGCATTTGATCTTTCATGTAATCTTACAAGGATTCTAGAGTTCTGTACCCGTGAGATTCCTCAAGCA TTCATGTCAGGACCAGACACAAACCTGCGAAGGTTAACTGAATTGATCGTCTTTATCTTAAATCAAATTACTTCAGCAGCCGATGCTCAATTTTTTGACT TATCACTTGGACGGCACGATCAATCTTCAGAGAAAGTAAACAGAGGCATGATATTGTCACCGCTTGTAGGGATGATCTTAAATTTATTGGATGCTACTAA TTTGGCTGAATGCCGAGAGAACAATTATGTTGTGGATGTTTTTGCAAGCATGGACTGTCCAAATACTGTTCATTATGGATTCCAGTATCTTCTGGATTAT AACTGGGACGGGTCTTTTAAGGGGGAGGCTTATTTGGCAAAGTATGAGCAGCTAGAGAAATTTCTGACCCTCCTTACTTGCCGCACAATGGCGCAATATG ATAAAGTGGAAGGTGTGGGAGACAAGGATATTGATGATAGCTTGTGCTGCATATGTTGTACATACAAAGTGGATGCTCTGATTGCACCTTGTTTACATAG ATCTTGCTATGGCTGCATAACCAGACATCTTTTGAACTGTCAGAGATGTTTCTTTTGCAACATAGCAGTTACAGGTGTAAGCAAAATTGATGAGAAGATG GGCTAAGACACACTTTTATGTGGCTGCTTGGTCCCTGGTGGAACTTGAGCCAGTAAGTGACTTATTAGCTTATCTAGAGGAAAAGGAAACCGATAGAAAA GAGTGTAGAGGAAGTGGAAGGGCAGGGTAGGATAGCAGATAATATAATAAAATAGTGTAATACTTGCATGGTTATTGGTGAGTCTCTGTGTCATAGGGGT TAATAGGGATGGTCTAAGAAGTCAATATGTTGAATTGAGAACTATGTTGGCTGTTAGAGAGTATCATATTTGTTCTGTCAGTAGGCAATGTAAGTGGCAA GGAAAATCTCCAGTTCTCCTTTCAGCTTGACAACTCTTCATTTTTCACAAGATTAGCCTAGGAAACCTGCTAAAATGGTGGGTGCAATTACATGTCATCA CATATTTTCTCTCCGAAATTCATGTTTACAATCAGTATTTGTGCCTCCCAACCGTGCCTTGATGGCGGTCTGGTGGAATCGGCTATACCAAGTTTGTAGT TTTAGCCGGTCATTGCTAGCAGTAATATCTGTTCCATTTGGCAGTTGTACTGTTCTTATTGACATGTACTTCTTATGTGAGTTCATTGATCATTCCATTG AAATGTTGATGAAATGCCTGACAGGAGTGTACCAAACTGAGTCCTTGATCTAAAAAATTACCCGGGAAGTGGAACACCGTCATCATGTCATCTTTCGACT CTTTCAGAATGGTAGAACAGGATATTAGTATGGAATGCAGATGAAAGTGCAAATATATTATAGGCTAGAACAACACCAAAGTGAAACATAGATGAGAAGC TCAGCTGGATTTTGTCATCCATTTAGTAAAATTATCGCTCTGGATTGTGTTAGTAGTTCATCGTCTATTCAATGTTTGTAATTTGTTTATAGAAAAGAAA TTATAAGAACATGTAGTCTAAACCGAGCAAATGATTAGATGCATGGGGGTTTAAACCAGGAAATAAATTTTGTATGGAAAGCTTGTATCAGTTATATGAT TTGGATGCTAAAAATGATACAGTCAAATTGTAAAAGGTAATCCCACCATCCATCTTTTCTCTATACTCCTTCAACAACGTTTAAAGATGAATAATCGAAC AAGCATTTTGGCATGCTGAGAAGAGCATTTTGAATTCCAAGACTTAAAACAGGGACCAATATGACAAGATAGGAC BLAST
Tissueflowers
Gene nameLI_gene_39776; 
Additional informationdetails; 

Expression of Ll_transcript_43278

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_43278

BlastpE3 ubiquitin-protein ligase RKP from Arabidopsis with 61.34% of identity
BlastxE3 ubiquitin-protein ligase RKP from Arabidopsis with 61.1% of identity
EggnogRING finger protein 123(ENOG410XQ4V)
KeggLink to kegg annotations (AT2G22010)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019462458.1)
PfamSPRY domain (PF00622.27)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;