| Id Trinity | FTRINITY_DN54108_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_43329 |
| Sequence | GTAAAATCCTAACAAGAAAACTAGCAAAACAAAAAAAGTGAATATATGGTAGTAGTTACCACTTATCATGATAACCTCAACTCCAATCTGTCTTTGAGCA CGTTAGATTCGATTGTTTAAGGTCATCACCAACTCATAAATCTTAAACAATATTAATAAACCAAAATCCCAGGTCTTATTTATTGTCTTCCTTTTCTTTT CTTTCAGAAACAAATCCCCCAAAGAATCTTTCACACCCACACAGAGAAAGAAAGAAAGAAACACCGTTACTGTCTGATTCGAATAACGCAGAACTCAAGT GTTCGATTGATTGATTAAGATTTATAATGAAAGCTATGGAAACCGTTTATGATCTGATTGATGAGGTTAAAGTTCGCACTCTTTGGTGGTTCCTTTGTAT ATTCGCAGTTTCTTATTTCTTAACCAATACAAGTAAATCAATGTGGATGAATGCACCTATTGCAATTCTATTTGTTTCTGCTCTTCGCATTATTTTCAAC ACGGTAGAATTCCGTTGGAAGGTTCAACAACCTAGAACACAGACATATCTTTCTCACCTGGAGAAAAAACAGTTGTCTCCTAAAGATCCACGCCTCTCTA GTTCGCCTACCCCGGCGAAATGGAAGAGGAAAATTAATTCTCCCGTTGTAGAGGCTGCAATGAGTGATTTTATTGGGATGATATTGAAGGATTTTGTGGT AGATTTGTGGTACTCTGAAATTACTCCAGATAGGGACTTTCCTGAGCATATACACGAAATAATCATGGATGTTCTCGCTGAAATATCAGGAAGGGTTGAA GAGATAAATCTTGTTGACTTGCTGACAAGGGATATAGTTGATTTAGTAGGTGATCACTTGGAACTTTTCAGAAGAAATCAAGCTGCTATAGGTGTTGATG TCATGAAAACGTTATCTTCCGAGGAGAGGGATGCGAGATTGAAGTTCCACCTGTTGAACTCTAAGGAGCTTCATCCAGCGCTAATATCTCCAGAGAGTGA GTACAAGGTTCTTCAGCGGTTAATGAGTGCAGTTTTAGCCACAGTGCTTAGACAACGTGAAGCTCAGTGTCCTGTGATTCGATCTATAGCTCGTGAACTT TTAACTTGCTTGGTAATGCAACCTATTATGAATTTGGCAAGCCCAGGGTATATTAATGAGCTGATCGAATTGCTTCTACTAGTCCTTAATCATGACGGTA CACAATGGATGGATGGTGATCAGTCAACTAATGTAGTGAGTCATCACCATGGTGATTCTGTAGCTACTGGGATGGAACATGACAATCTCACAGCCTCTAA TAAGCATCCATCTCTAAATCAAGGGACTGATATGACACTGACTAAAGCAAATCACCAGGGAGAGACATCATTGCAATATAACACACACACTCAAGAAACT TTGCAGGCCAGGCCTGGTGATTGGGCACGAATGTTGGATGTTGCAACTCAGAGGAGAACTGAAATTCTTATGCCTGAGAATCTTGAGAACATGTGGACAA AAGGAAAGAATTACAAAAAGAAAGAGAACAAAATTAAAAAAGCTGGCTTCCGGGATATTCCTGCAAAGAGTCCTGCCATGGAAAGCTCACTTCCTTATAG AAAATTGGCACAGGAAACATCAACAAGTAAACTTGGAAATCATACAGTTCTAGAAGGAAAGTCTTCGCTGCCGTCAATGCATACATTTGGTTCAGATCAT CAACAAAATGTTGGAAGCACAAGTAGGTTAGAAACTTCTAAGGACCCTGACAAAGAATTATCTTTAGAGGGAGAGCATCAAGATGATAAAATAAAGGGTA TCAGGGATCCTGCTTCTAATGTCCCTAAAAGTCCGCTCAAGAGATCCAATAGTGCTTCTGCCTTGGTAATCCAACCTAACAAAGAAGAAGGCTCCATAAT TTCAGAGTTCTACACCCCTGAATATGAGAGGAGCAGTGAAGGATTCCGGGGAAAGAGTTCTTCTGACATGATTGTTAGGAAAGAGGGGCAATTACTTCCT AAGCTCCGCTGCCGGGTGATGGGAGCTTATTTTGAGAAACTTGGTTCCACATGTTTTGCTGTCTATTCAATTGCGGTGACTGATGCACAGAATAAAACTT GGTTTGTGAAAAGAAGATACAGGAATTTTGAGAGACTGCATCGGCATCTTAAAGATATTCCCAATTATACATTACATTTGCCTCCTAAAAGGATATTTTC CTCGAATACAGATGACGCTTTCGTACATCAACGTTGCATTCAGCTTGATAAATATCTCCAGGATCTTCTGTCAATAGCTAATGTAGCCGAACAACATGAA GTATGGGATTTTTTTAGTGTTTCCTCAAAGAACTACTCTTTTGGAAAATCTTCTTCGGTGATGAAGACCTTGGCAGTCAATGTAGATGATGCTGTGGATG ATATTGTACGCCAGTTCAAAGGGGTTTCAGATGGTTTAATGCGAAAGGTTGCTGCTTCATCATCCCCCATCTATGAAGGTTCTTATATGCCTACCACATT GAACTTGTCCTGGAATGCAGATGAAATGGATAAAATTATTCCAAGGCGAAATACGGCAGAAAGTAGGTTATCCTCTGATAATGAGGATGGTGAAAAGAAT AGTAATACTAGCGAGAATATTGATAGAGAAGTAGCACAAGATAATGGGTCACATTTTGACAATGTGTTGATCTCAAAGGGTTACCCATCACGAGTAATAG ACCGCAGTGAAGAGCCTGGGAACTTAGATTCAGATATAAAGCATGATATGGTGGAAGCTAGGGTTGGCAACGATGTTCCTGCTACAAATTTCACCCTAAA ATATGACAATTTAGAGGATCCAGTTGGAGTGCCACCTGAGTGGGCCCCACCTAATGTCAGTGTTCCTATTTTGAATTTGGTTGACAAGATATTCCAGCTT AAGAAAAGAGGCTGGATAAGAAGACAGGTCTTTTGGATATCGAAACAGATATTACAGTTGGTGATGGAAGATGCTATTGATGATTGGCTCCTGAGGCAGA TTCACTGGCTCCGGAGAGAGGACACTGTTGCCAAAGGGATTCACTGGCTCCAAGATGTCCTGTGGCCTGGGGGTACCTTTTTTCTAAGATTAAGGACTCC TGAGATAATGAGTAGTAGCAGTGGAATTGATCAAAAGGCTTCGCAAACAAAAAGTGTATCTGGTGGAAGCAAGAGCGGGACATCTGCGTCGGGGTCTTTT GAGGAGGAGCTTGCGGCTGCCCGCAGAGCAAACAATGTGAAGAACCTTCTGTTTGATGGAACTCCAACGACCTTAGTCAGCTTAATCGGGCACAAGCAAT ACAGACGTTGCGCCAGGGATATATATTACTTTACTCAGTCTACTATATGTGTGAAGCAACTTGCTTATGCAGCCCTGGAACTTATACTATTGTCGGTCTT CCCGGAGATGCGGAATGTTGTCTTGAGTGTTCATGAGAATATGAACGTTCACCAACCTGTATAGAGTAGTGCCATGCACGTGTTGTAGATGAATGAGATC GTGAGAAAATGATTTGGCTAATTTTATGGCTTTGCAAGAATAGTTGGCATGACTAATGTGATTTTTCCTTATATAGGGAACTTTAGGGGTTTGGTTTTGT ATCTGTTTCAAACTGTATAAAGCTTGGGCTTAGGGTGTGTACATAAACAACCATTTTGTGGATTCTTTATGGCATTATTCCCCATTTTAATGGGGGCTTT TTTATTTATTGTTGCAGACTCTAAAAAAGAATCTGACTAATATTCTTTATTCCTTTCTCATTGGGATTTGAGGTATTTCATTATTTAAAATTAGCAGTCC CATGTTTTGCCTTTATTACATGAACAAGTGTTGGCCACGACAGTATCTCATGTTGGCGTTGCCTTTTGTGAATACTTAACTTTTATCCTTAAATAGTTGC ATACTTCGGAGâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_39808; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_43329
| Blastp | Sorting nexin-13 from Mus with 22.81% of identity |
|---|---|
| Blastx | Sorting nexin-16 from Mus with 37.5% of identity |
| Eggnog | Sorting nexin 13(ENOG410XRJ0) |
| Kegg | Link to kegg annotations (217463) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019445759.1) |
| Pfam | PXA domain (PF02194.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |