Ll_transcript_44308

• Id Trinity: FTRINITY_DN54110_c1_g4_i1
• Name Transcript: Ll_transcript_44308
• Sequence: TGCAATACAGGAAGAGATACTTATGGAGATGGGTGTTGGTATGTTTATCTTAGTGTCATATATTAGTTGTTTTTTGTATTATGTGATACATTTTATGATA TATTTTTGGAGATGATTGTTGTCATGTTGGTATGTTGATTTTTTTAGTATCATTAATAGAGTAGGTCATGATATTATTTATGTGAATTAAGCTCTACAGA AGACTACCTCAAAACCACCATTGCCGGCGTGCCGCAATCATTGGATATGTGTATTAGTTTCCAATGTGACAGCCATTACCACCCCATGTCTTATAGGATA TTCACTTGTTAAAGTGTTATATACTTTAAGGCAAAAATGTGAGAGCAGGAAAACCCGAGTAAAAAGTGTGGGCTAGTAACGAGACTCCTACCTAGTAGGG TCTGGAGAGGGTTGATTGTAAAGAAAAGAAATCTAAGAGAAGAAGATGATAGAAAACTGAATTTTTATGTATTTGTATTTCTATATTTTCTGATTACAAA GAGAGAAGAAGCATAACTCCAATTTATAGGAAATTATCTAACTAAACAGTTACTATGACAGTTACAGAATAATGTAACTGCCACTAACTACTGAAGTTGT GGGTGAGTTGAAAAATCTATCAACCACTTGAAGCAACTTCCTTAGAATCAGAAATCTAGAATTAGAGAGAGGCTTGGTCAGAGCATCTGCTGTCTGAACT TCAGATGGAACATGCTTGACATGTAGCAGCTTGGATTGGACTCTATCTCTTACAAAGAATAGATCCAATTCAATATGTTTTGTTCTGTGATGCAAAACAG GATTGTGTGCCATGACTACAGTGCTGAGATTATCACAGAAAACCATAGGAGTTTGATGAGCAAATTTTAACTCAGAGAGAAGAGATTCAATCCAAATAAG TTCTTGAGAAGCTAGGGCTAGGCTTCTATACTCAGCCTCAGTGCTTGATCTGGAAACAGTTTGCTGCTTTTTAGACCACCAAGTGACAATATTTGGACCC ACAAACAGGCATGCTCCTGAGATGGACTTTCTATCATCAGGATCAGAAGCCCAATCAGCATCACAGAATGCTGTGATAAGTAGAGGAGTGTTAGGTTTAG CTGGTCTGAGTTGGAGGCCAAGAGTGATAGATCCTTGTAAGTACCTTAATATTGTTTTAACAGCAGTCCGGTGGTGCTCCAAGGGATTAGACATATACTG ACAGACTTTGTTAACATTGAATGCCAAATCTGGTCTTGTAATTGTGGTATACTGAAGTGCTCCTACAATAGCCCTGTAAAGAGTAGGATTATCAAATGAT GCAGACCCAATTTTTGTCAGCTTACAAGAGGATGACATTGGAGTAGGTAGAGGCTTTGCAGAGTCCATGTTTGCCTTTTTGAGAAGATCTTTTATGTACT TTGTTTGAGAGAGAAATAGAGATCCATTAGGCAAAGATTTTACCTCAATACCAAGAAAATAGTCTAAGCTTCCCAACCTCTTTAATGCAAAGGCATTACT CAATTTGTCAATAAGCTGATTTATCTGAGAAGTAGATGATCCTGTGACAATGATATCATCTACATAAACAAGCACATAGAGTCTGTGTGTAGATGAAGTG TGAATGAATAAAGAATTATCACACCTACTGTTGAGAAAACCAAACTGAAGCAGAGTTCCTTTCAGTTTTTCAAACCACTGCCTTGGAGCCTGTTTTAGGC CATAAAGAGCCTTGTGCAGTCTGCATACTTGACCCTTATTTCCAGAATGAAATCCAGCAGGTTGAACCATATAGACCTCTTCATTTAGAATACCATTCAG AAATGCATTATTAATGTCTAACTGTTCTAGAGGCCATTGATAGGTTACAGCTAAGGTGAGGAGAATTCTGATAGTGATAGGTTTAACAACAAGAGAGAAT GTTTCTGTGTAGTCAACACCCTGTTTTTGATGAAAACCCTTTGCCACAAGCCTTGCTTTATACCTATGTACTGTCCCATCAGGATTTTCTTTGATCCTAA ACACCCATTTACAACCAATAGCTTGTTTGTTTGGAGGCAAATCAACAATAGACCAAGTGCCCAACTTAAAGAGTGCATTGTATTCTTCTTGCATAGCCTG AACCCAAAGAGGATCACTGAGAGCAGTTTTCACAGATGTTGGTTCACTTTGAACAAGCATAGCCCTAGGTACTCTAGGAACAAAGGACTTATCAATACCA GACTTGGATCTAGTTTGCATAGGGTGAGTGGACTGAGGAATTAGAGGAACAGTGACAGAGTTAGTGTTTGTGGATGACTCACTGTTGGGAGTTAGGGACT CAATATGTAATGATGAAACAGGTTGACTTGTTTCAGACATGAGAGGAGATGAGACAGGGACAGATTGTAATGAGGGAGAATTCATAGAAGACTGACTAGG TGTGACTGCTGGAACAGAGACCAGATTAGGAGATTGGGAAATGGGAGTATTTGTAGGGTCAGAATTTGTGGTGGTTGTAGTAACAATATGGGGATAAAAG TGTGTTGTATGAGGAGGATGAGTTGTAGGTGGAGATATGGGTGTTGAGTTTAAGGTAACAGACTCTTTTGATGCATAGGGAAAGACATACTCATTAAACA CAACATCATTGGAAATGTAGAGTCTACCATCATGAGAAAGACATTTGTATCCTTTATGATGAGTAGAATAACCTAGAAAAATACATTCAGTAGACCTAGA CTCCATTTTGTGTTTGTTGTAGGGTCTTAACAAAGGAAAGCATGCACACCCAAATACTTTAAGGAATGAGTAATCAGGTTGCACACCAAACAAGAGAGAA TGAGGTGAAGACTTTTGTAGTATTAGAGAGGGCAATCTGTTTATTAAAAACACTGCAGTAGTAAAGGCATACTCCCAATATGACATAGGTAAAGAGGCAT GAGTAAGCAAGGCTAAACCAGTTTCCACTATGTTTCCTTTCAACAGTGCCTTGTTGATAATGACTATAAGGACATGAAACTCTATGAACAATGCCTAGGG AGACTAGGTATTCAGTAAATGGTCTAAACTCACCCCCCCAATCACTTTGTATGGCTTTGATTTCTGTTTGGAATTGTGTAT
• Tissue: flowers
• Gene name: LI_gene_39823;
• Additional information: details;

Expression of Ll_transcript_44308

FPKM

• FPAB: 0.4
• FPNAB: 0.7
• LF1: 1.1
• LF2: 0.8
• LF3: 0.8
• LF4: 0.5
• UF1: 0.5
• UF2: 1.1
• UF3: 0.6
• UF4: 0.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_44308

• Blastp: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 33.77% of identity
• Blastx: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 37.5% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019414575.1)
• Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) (PF07727.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;