Id Trinity | FTRINITY_DN54116_c6_g3_i14 |
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Name Transcript | Ll_transcript_45245 |
Sequence | CAGGAACATACTCAGAGGAGTCAAAAAATAAAATAAAAGCATTGAACAAAGAAATGCATGGAAAAGATAAATGAAGAGTTATTACTAATTATTCAAAGCC AGTGGTGTAAGAAAAATAAATAAATAAATAAAAAGAAACAGAGAAGGTATCTTCACATGGTTATAACCATAGCCACAGAAGTAGTAGTAAAGAAGAAGGA AAATAACAAGTATTGTTCCTTCTTTCTTTGTTCTTCATTTTCTCTCAACAACTACCACTTTCTCTTGCCGTTAAAATTCACCTTCTTATTGTGCTGTTTG ATGCTGCATCGTTATCTTTTCATTCATTCAGATATTGAGATTTGTTTCATTAACTTTATGTGGAATTAATCTCAAGTTAACTATTTTCTTTGTTTTGGGT TCTTCTATATATTTCTATTCTCTTCCTTCTTCTTTTTTTTCTTTCTCTTTTTAATGGAAACGACAACGTTGGAAAATTGCTCTGTCAAAGTTGCTCTTCA TATTCGTCCTCTTATTGATAATGAACGACAACAAGGTTGTAGAGAATGTGTTTCAGTGACACCAGGAAAACCTCAGGTTCAAGTTGGGTCACATTCCTTT ACATTTGATCATGTTTATGGAAATGGTGGATCTCCTTCGGCTAACATTTTTGAAGAATGTGTTGCTCCATTGGTTGATGGCTTATTCCAAGGATACAATG CTACTGTTCTTGCTTATGGTCAGACAGGATCTGGGAAAACTTATACCATGGGAACTGGCTGCAATGACAATTGTCAAACTAGATTAATTCCCCAGGTTAT GAATGCCTTGTTCAACAAGATTGAAGCACTGAAGCATCAAACAGAATTTCAATTGCATGTCTCCTTCATTGAGATTTTGAAGGAAGAGGTGAGGGACTTG TTGGATACAGAATCTTTAGGAAAAACGGAAACGTCTAATGGCCATTCTGGTAAAGTTCCTGGGAGGTCACCAATTCAAATTCGCGAAGCATCAAATGGAG CAATAACATTGGCAGGATCAACCGAAGTTGCTGTAAGTACATTACAGGAGATGGCTGCTTGCTTGGAGCAGGGTTCTTTAAGTAGGGCAACAGGAAGTAC AAATATGAACAACCAGTCCAGTCGGTCACATGCCATCTTCACAATTACATTAGAACAGATGCACAAACTTCATTCAATTTCTTCAAGCAATTACACTTCA GAGGAAGATATGGGTGAAGAATACATCTCTGCAAAGCTCCATCTGGTAGATCTAGCTGGATCTGAACGAGCTAAAAGAACAGGCTCTGATGGTCTTCGTT TACAGGAAGGCATACACATCAATAAAGGTCTTCTTGCACTTGGTAATGTCATAAGTGCACTGGGGGATGAGAAAAAGAGAAAGGAGGGTGCACATGTTCC TTATCGGGATAGCAAACTAACTCGACTCTTACAGGATTCACTTGGTGGAAACAGCAAGACTGTCATGATAGCTTGCATTAGCCCTGCAGACATCAATGCC GAGGAGAGTCTTAATACTCTCAAGTATGCAAATCGTGCACGCAATATTCAAAATAAGCCTGTCGCTAATCGAGATTTGATATCCAATGACATGCAGCAAA TGCGCCAGCAGTTAAAATACTTGCAGGATGAACTTTGTGCTCGAGGAGGAGCTCCCTCTGATGAATTACGGGTCCTTAGGCAAAGGATTGCTTGGCTTGA AGCAACTAATGAGGACCTCTGTCGAAAACTTCATGAATATCGCAGCAGATGTGCTTTTGTCGGGAGAAGTGAAATAGATGAACTAGATGGACAAATTTAT CGTGAGAAAACTGATGGGCTTGAGAGGCACTTACAGAGCTCAGATTCATCTGACCTTCCCATGGCTGAAAGTATATCAGGTGAGAATTCGAGGGAAACTG ATGAAGCAGCAAAAGAACTGGAGCATGTACTCTTGCAAAATAAAATGAACAAAGAGATGAATGAGTTAAATAAGTGCTTAGAACAGAAAGAGTCTGAGAT GAATCTTATTGGAGTCAACATTGAAGCACTCAAACAGCATTTTGGGAAGAAAATTATGGAACTTGAGGAAGAGAAAAGAACAGTGCAGAAAGAAAGGGAC CATTTGTTGCATGAGGTAGAAAAACTTGCTGCTAATTGCGACGGAGTGCAGAAAACTCAAGATGTTCGTGTCCAAAAATTGAAAGCACTGGAATCACAGA TTTTAGACCTCAAGAAAAAACAAGAAAGCCAGGTGCAGCTACTAAAACAAAAGCAGAAGATTGAAGAAGCTGCAAAAAGACTGCAAGCTGAAATACAATA TCTAAAGTCTCAGAAGGTTCAGTTGCAGCATAAAATGAAGCGAGAGGCAGAACAATTTCGACAATGGAAGGCTTATCGTGAGAAGGAGTTACTCCAGTTG AAAAAGGAGGGAAGAAGAAATGAGTATGAAATGCATAAACTTGAGGCTCTAAACCAGCGGCAAAAAATGGTTCTTCAAAGAAAGACAGAGGAAGCAACAA TGGCTACAAAAAAGCTAAAAGAATTGTTGGATGCCCGCAAATACTTGCCACATGAAAACTCCGTGTATGCAAATGGACATCTACAGCCGGGGAAGGTCAA TGAGAAATTCCTCCACAGGTGGCTTGATCAAGAGCTTGAGGTCATGGTGCATGTGCATGAAGTTCGCGCTGAATTTGATAAACAAAAGCAAGTTCAAGCT GCGCTGGAAGAAGAGTTGGCTTTACTGAAACAGGTGGATCAATTTTCAGATAGACAGAGTATCTCCACACATAAAGGCAGATATTCCAGACTGTTATCCA TGTCACCAGATGAAAAAGTGGCCCGAATAGCTTCTCTTGAAAACATGCTAGGAATGTCTTCAATTGCTTTGAAATCCATGGCTTCACAACTTACCGAGGC AGAAGAAAGGGAACGCACACTAAATGACCGTGGGCGTTGGAATCAATTACGTTCGATGGGAGATGCAAAGAATGTGCTTCAGTATTTGTTCAATGCTACA GCAGAAACTAGATGCCAGTTGTGGGAAAAGCATATGGAACTTAAGGACTTGAAAGAACAACTAAGTGACCTTGTAACACTGCTACAACAAAGTGAAGCAC AGAGAAAAGAACTTGTAACAGAGCAAAAAACTAGCGAACAAGCTGCTATCGTCACATTGAATACACCGACAGAATTGGAAAACTCACGGTCCTTGAAACA CCTGGCTGATGAAATGAGTGGTCCATTGTCTCCCATGTCACTTCCTGCACCAAAGCAACTCAAATTCAGCCCTGGAGTTGTTAACGGGTCAGCCAGGGAT GATGCACAAAAGATGATACCCTTCGGAGAGTTATCAACAAAAAGGCTAGTAGCTATAGGACAAGCTGGAAAACTTTGGAGGTGGAAGAGAAGTCATCGTC AATGGCTGCTACAATTCAAATGGAAGTGGCAAAAGCCATGGAAACTCTCGGAATGGATCAAACATAGTGACGAGACAATCATGAGGTCAAGGCCTCGAGC ACAAGCATCGATAAATGTGATATGATGTTTAGCTGATAACACGGGATGTTATTACTACTCTGAATATTTACTGACTTGTGTTTAAATATGGCTTGACAAG AATACAGTTAGTTTCAGATTTTAGTATGTATGCAGTTCTAATATAAATCAGAAGAGCTTCCTGGTGGGCTTTTTTTATGAGATACAGTTTGGTTGCTGTG GACAAATTCTGGTATGGTTCTATGTATATATGTTGTAAATGCACATGGTAGCTGGCTTAGGTGTTTAAGGTTGAACTAAAGGAAAAAGGTTGCACTCCTT TTGCCTTTTTGTGTATATTATTAGATGATATTGTTTGTGATGAAGATGTTCCATGTTAATTCTGTAGTTTTTTTCAAAATGTTTATGGAAATTGTGATCA GTGCAGCGTAAAAATCTGTTTACACCGATGAAATAGTTCTCGGAATGCTTGTGTATTATGACCTCAGCTAGTTTTCTTTACACTTGATGCTTTTGTTGAG TAAATGAAATGATGAATGCTTGAACTAAAATTGTGAAGTTCCCACTGCACTGCAATTCTGTCTTCCCCTTGACTTGCACTGCAAGTGCGGAAACATGGAA TTGGAAACATGAACAAGTTAGTCAAAATCGAGATCTTAAGTGGAATTGGAAACATATGGCATAAGAACAAGTTAGTCAAAATCGAGATTTAAGAGTATCA AACCATTCCCTCATCATCATTAACCTGGAAAATCCAAGACAACCTATAAGAAGGGCTTTCAAGTTTCAAATTCTATAATATGTGGAGATTGTCACCTCAG TTCCTTCCACTGGTCAAGGATACTTTGAACACACATACAAATGGAAGCAGATTATACGAAGTTATACAATAATAAAAGCCTTTATTTCACTAGATGAAAT CGGCTACATGAACGAAACTATATTATAATACTATGTCTTCAAGTTTTGCATACTATTTTGGATCTTTAGTTTTGTGGAGATTAAAATGGTGCATGTAAAA GGATGTAACTTGGAGAGTTCAGTACAAAATTCTTCCACACTAGACTTAAAGAGAAGTATAATAAACATGAGATTTCTGCTATCATGAATACAGAGGGAAA CTGGGTATAAGATCTAGATGAAATTTGGAATACTTTTGTTAACCACTACCTGTGATATCTAGCAACACTTTTAGCCATTGATTCATAAAATGGTCCTGAG ACTGATGGATACAACAATGAATTATACAAAGCATCTTGGAATATTGTTCGTCAGGAAAAAATGAAGAGCTATTACAATATATCAGGTCATCATGAACTAA AACTTTAAGGTAATAATTTTATGAGTTTTTTCCATTTATAAACTCTCACTGAGAATTCACACTCAAATAAATATAACACAAATTAATGTTACCACTATTG CTTTATTAAGAATTATTTCTAAATTACTAATAGAGCTTGTTAAACTCTATGGTTCTTCTCTAGACAGATTAGAGTTTGGTAATTTTATCCAAAAAGGTTT TTTTAGATATTTTCTT BLAST |
Tissue | flowers |
Gene name | LI_gene_39881; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_45245
Blastp | Kinesin-like protein KIN-4A from Gossypium with 69.17% of identity |
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Blastx | Kinesin-like protein KIN-4A from Gossypium with 69.17% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (107917911) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019446817.1) |
Pfam | Microtubule binding (PF16796.4) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |