| Id Trinity | FTRINITY_DN54116_c6_g3_i8 |
|---|---|
| Name Transcript | Ll_transcript_45238 |
| Sequence | CAGGAACATACTCAGAGGAGTCAAAAAATAAAATAAAAGCATTGAACAAAGAAATGCATGGAAAAGATAAATGAAGAGTTATTACTAATTATTCAAAGCC AGTGGTGTAAGAAAAATAAATAAATAAATAAAAAGAAACAGAGAAGGTATCTTCACATGGTTATAACCATAGCCACAGAAGTAGTAGTAAAGAAGAAGGA AAATAACAAGTATTGTTCCTTCTTTCTTTGTTCTTCATTTTCTCTCAACAACTACCACTTTCTCTTGCCGTTAAAATTCACCTTCTTATTGTGCTGTTTG ATGCTGCATCGTTATCTTTTCATTCATTCAGATATTGAGATTTGTTTCATTAACTTTATGTGGAATTAATCTCAAGTTAACTATTTTCTTTGTTTTGGGT TCTTCTATATATTTCTATTCTCTTCCTTCTTCTTTTTTTTCTTTCTCTTTTTAATGGAAACGACAACGTTGGAAAATTGCTCTGTCAAAGTTGCTCTTCA TATTCGTCCTCTTATTGATAATGAACGACAACAAGGTTGTAGAGAATGTGTTTCAGTGACACCAGGAAAACCTCAGGTTCAAGTTGGGTCACATTCCTTT ACATTTGATCATGTTTATGGAAATGGTGGATCTCCTTCGGCTAACATTTTTGAAGAATGTGTTGCTCCATTGGTTGATGGCTTATTCCAAGGATACAATG CTACTGTTCTTGCTTATGGTCAGACAGGATCTGGGAAAACTTATACCATGGGAACTGGCTGCAATGACAATTGTCAAACTAGATTAATTCCCCAGGTTAT GAATGCCTTGTTCAACAAGATTGAAGCACTGAAGCATCAAACAGAATTTCAATTGCATGTCTCCTTCATTGAGGTATATCCATAACACTATGTGCTGGTC TGCATATGGACCCTATCGTCGAACAGTAACACGTGTGCGCACACACAAATGAACCCTTTAATTATAGGTTCATCAACTTCTCCAGTTATGAATGTTCTAT GGAAAGTGGATTTTTCATGCAGCAGGTTATTTTGAAATAGTGTTAAAATTCACTGGCTGAGCACTTGACATTGCATTTAATAGGGGGGAACAAAATCTTT TTTTGAATTCTTGTTGTTTATGGAGGCATAATTGTGCATTTGATTTTGAAGATTTTGAAGGAAGAGGTGAGGGACTTGTTGGATACAGAATCTTTAGGAA AAACGGAAACGTCTAATGGCCATTCTGGTAAAGTTCCTGGGAGGTCACCAATTCAAATTCGCGAAGCATCAAATGGAGCAATAACATTGGCAGGATCAAC CGAAGTTGCTGTAAGTACATTACAGGAGATGGCTGCTTGCTTGGAGCAGGGTTCTTTAAGTAGGGCAACAGGAAGTACAAATATGAACAACCAGTCCAGG TAAATAATAAGCTTTCAGCATTTCTTTTCCCCGAAATTGATAAACATTGCTCGATAAACTAATCTACGTTGTGACGACTGGTTTGGTGATATGCCGTGGG GTGTGAAATTTAACATTCTTTCTTTGTAAACCATTTCATGCTGACACCACACCATGTACAATATGAGCACTGAATGCAAAATCATCCTTCATATCAGAAA ATCAGATGACGTTTTCTAAATGGTGCTATCTCAATAGCAAGGAAAAATTACTTGGACCAACCTCATAGAGTTTAGTATCATTAATATTTATCAATTACCA TGTATTTGGTGTGGGTCAGCTTTCTAAGTATTGCTTCTTTATTGGTTCTTTCTTTATCGTTTTCCATGGAATGGGTAAGTATAACTTTTTACTGTAGTTT CCATTGGATTCTAAACAGAAACAACAAATTTGAGTGATAGAAAAGCCTCATGTTTTTGGTTTACACAAGATTTAATCCGGATAATCTAATAACGTGTGGA CATGATCTATGATAAAGCATTATGACTTCGTTCGATCCATGTAACCGATCCCACCTAGTGGGACTATGGCTTGGTTGTTGCAATCTAGTAACTCGTGGCT CCCCTTTTGCTTGTATTAGTCGGTCACATGCCATCTTCACAATTACATTAGAACAGATGCACAAACTTCATTCAATTTCTTCAAGCAATTACACTTCAGA GGAAGATATGGGTGAAGAATACATCTCTGCAAAGCTCCATCTGGTAGATCTAGCTGGATCTGAACGAGCTAAAAGAACAGGCTCTGATGGTCTTCGTTTA CAGGAAGGCATACACATCAATAAAGGTCTTCTTGCACTTGGTAATGTCATAAGTGCACTGGGGGATGAGAAAAAGAGAAAGGAGGGTGCACATGTTCCTT ATCGGGATAGCAAACTAACTCGACTCTTACAGGATTCACTTGGTGGAAACAGCAAGACTGTCATGATAGCTTGCATTAGCCCTGCAGACATCAATGCCGA GGAGAGTCTTAATACTCTCAAGTATGCAAATCGTGCACGCAATATTCAAAATAAGCCTGTCGCTAATCGAGATTTGATATCCAATGACATGCAGCAAATG CGCCAGCAGTTAAAATACTTGCAGGATGAACTTTGTGCTCGAGGAGGAGCTCCCTCTGATGAATTACGGGTCCTTAGGCAAAGGATTGCTTGGCTTGAAG CAACTAATGAGGACCTCTGTCGAAAACTTCATGAATATCGCAGCAGATGTGCTTTTGTCGGGAGAAGTGAAATAGATGAACTAGATGGACAAATTTATCG TGAGAAAACTGATGGGCTTGAGAGGCACTTACAGAGCTCAGATTCATCTGACCTTCCCATGGCTGAAAGTATATCAGGTGAGAATTCGAGGGAAACTGAT GAAGCAGCAAAAGAACTGGAGCATGTACTCTTGCAAAATAAAATGAACAAAGAGATGAATGAGTTAAATAAGTGCTTAGAACAGAAAGAGTCTGAGATGA ATCTTATTGGAGTCAACATTGAAGCACTCAAACAGCATTTTGGGAAGAAAATTATGGAACTTGAGGAAGAGAAAAGAACAGTGCAGAAAGAAAGGGACCA TTTGTTGCATGAGGTAGAAAAACTTGCTGCTAATTGCGACGGAGTGCAGAAAACTCAAGATGTTCGTGTCCAAAAATTGAAAGCACTGGAATCACAGATT TTAGACCTCAAGAAAAAACAAGAAAGCCAGGTGCAGCTACTAAAACAAAAGCAGAAGATTGAAGAAGCTGCAAAAAGACTGCAAGCTGAAATACAATATC TAAAGTCTCAGAAGGTTCAGTTGCAGCATAAAATGAAGCGAGAGGCAGAACAATTTCGACAATGGAAGGCTTATCGTGAGAAGGAGTTACTCCAGTTGAA AAAGGAGGGAAGAAGAAATGAGTATGAAATGCATAAACTTGAGGCTCTAAACCAGCGGCAAAAAATGGTTCTTCAAAGAAAGACAGAGGAAGCAACAATG GCTACAAAAAAGCTAAAAGAATTGTTGGATGCCCGCAAATACTTGCCACATGAAAACTCCGGTAGAACATAACCTGGTATTAATTTCTTTTTACATTTCT GGTTTCCTAATTTTTTGCTGTATATTTCAGTGTATGCAAATGGACATCTACAGCCGGGGAAGGTCAATGAGAAATTCCTCCACAGGTGGCTTGATCAAGA GCTTGAGGTCATGGTGCATGTGCATGAAGTTCGCGCTGAATTTGATAAACAAAAGCAAGTTCAAGCTGCGCTGGAAGAAGAGTTGGCTTTACTGAAACAG GTGGATCAATTTTCAGATAGACAGAGTATCTCCACACATAAAGGCAGATATTCCAGACTGTTATCCATGTCACCAGATGAAAAAGTGGCCCGAATAGCTT CTCTTGAAAACATGCTAGGAATGTCTTCAATTGCTTTGAAATCCATGGCTTCACAACTTACCGAGGCAGAAGAAAGGGAACGCACACTAAATGACCGTGG GCGTTGGAATCAATTACGTTCGATGGGAGATGCAAAGAATGTGCTTCAGTATTTGTTCAATGCTACAGCAGAAACTAGATGCCAGTTGTGGGAAAAGCAT ATGGAACTTAAGGACTTGAAAGAACAACTAAGTGACCTTGTAACACTGCTACAACAAAGTGAAGCACAGAGAAAAGAACTTGTAACAGAGCAAAAAACTA GCGAACAAGCTGCTATCGTCACATTGAATACACCGACAGAATTGGAAAACTCACGGTCCTTGAAACACCTGGCTGATGAAATGAGTGGTCCATTGTCTCC CATGTCACTTCCTGCACCAAAGCAACTCAAATTCAGCCCTGGAGTTGTTAACGGGTCAGCCAGGGATGATGCACAAAAGATGATACCCTTCGGAGAGTTA TCAACAAAAAGGCTAGTAGCTATAGGACAAGCTGGAAAACTTTGGAGGTGGAAGAGAAGTCATCGTCAATGGCTGCTACAATTCAAATGGAAGTGGCAAA AGCCATGGAAACTCTCGGAATGGATCAAACATAGTGACGAGACAATCATGAGGTCAAGGCCTCGAGCACAAGCATCGATAAATGTGATATGATGTTTAGC TGATAACACGGGATGTTATTACTACTCTGAATATTTACTGACTTGTGTTTAAATATGGCTTGACAAGAATACAGTTAGTTTCAGATTTTAGTATGTATGC AGTTCTAATATAAATCAGAAGAGCTTCCTGGTGGGCTTTTTTTATGAGATACAGTTTGGTTGCTGTGGACAAATTCTGGTATGGTTCTATGTATATATGT TGTAAATGCACATGGTAGCTGGCTTAGGTGTTTAAGGTTGAACTAAAGGAAAAAGGTTGCACTCCTTTTGCCTTTTTGTGTATATTATTAGATGATATTG TTTGTGATGAAGATGTTCCATGTTAATTCTGTAGTTTTTTTCAAAATGTTTATGGAAATTGTGATCAGTGCAGCGTAAAAATCTGTTTACACCGATGAAA TAGTTCTCGGAATGCTTGTGTATTATGACCTCAGCTAGTTTTCTTTACACTTGATGCTTTTGTTGAGTAAATGAAATGATGAATGCTTGAACTAAAATTG TGAAGTTCCCACTGCACTGCAATTCTGTCTTCCCCTTGACTTGCACTGCAAGTGCGGAAACATGGAATTGGAAACATGAACAAGTTAGTCAAAATCGAGA TCTTACATGGAATTGGAAACATGAACAAGTTAGTCAAAATCGAGATCTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_39881; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_45238
| Blastp | Kinesin-like protein KIN-4A from Gossypium with 71.78% of identity |
|---|---|
| Blastx | Kinesin-like protein KIN-4A from Gossypium with 65.9% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (107917911) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446819.1) |
| Pfam | Kinesin motor domain (PF00225.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |