| Id Trinity | FTRINITY_DN54120_c0_g4_i3 |
|---|---|
| Name Transcript | Ll_transcript_44899 |
| Sequence | ATCACTTCACATAAAACCCTATTTTCTTTGTTTTTCTATTACAAACACTAATACTCATGTCTACCACCGACGCCGAACACCGCGAAGAGGAAGATGTTCC CGCCGGCGATGACGAAGACACCGGAGCTCAAGTCGCTCCGATCGTTAAGCTCGAAGAAGTTGCCGTCTCCACCGGCGAAGAGGACGAAGATTCTATTCTC GATCTGAAAGCCAAGCTTTACCGTTTCGACAAGGATGGGAATCAATGGAAGGAGCGAGGTGCGGGAACAGTGAAGTTCCTGAAGCACAAGGTTAGTGGAA AAGTTAGGCTTCTTGTGAGGCAATCGAAGACACTCAAGATCTGTGCCAATCATCTCAGTAAGTGAAGTGTTCTTTTGGTTTGATGTTTTGGTATGTGGTT TTTTAATTGTGGTTTTTTGATTCGTGTTGTAGTTCTACCTTCAATGACTGTGCAAGAGCATGCTGGGAACGAGAAATCTTGCGTTTGGCATGCTAGGGAC TTTGCTGATGGTGAATTGAAGGATGAGCTTTTCTGCATTCGATTTCAGTCAATTGAGAATGCCAAGAAGTTCATAGAATCATTCCAAGAAGTTGCTGAAT CCCAGAACCCAGCAGAGGAAAGCAAAGATGCATCTGCTGCTGCTGGTCTCCTTGAGAATTTGAGTGTTGAAGGAAACAATGATGCAGACAAGAAAGATGA AGAGAAGTCTGATAACAAAACTGCAGAAGAAGAATCTTCATCAGGAAAGGAAAGCAAGGCAGATACAGAGAAGAAATCTGAAGAGCCTGCTTCCTCTGCT TGAGCATAATATCTATTCATATTTCCTTGCTATGCAATGTGCAAGTTTGGATGGTTGACCATTTTGTTGCCTTTTCTTGGGATATTGTCTCCTACTTGTA GTCTTCAGATTGTGTCACAGTGATGCTACCGAGCGGTATGTGTTCTCTGTCGAGTCTTTTTGTCATCATGCAATGTTTGAGTCAGGTTTGAATTATTGAG GGTCGGTGCTGTCTGAGTCTTGAGTTTACTAGTGTTATTTTCATTCTATATGTGTATTTCATTACAAGTAAAATGAGTCTGGATGATGTTGGGATTTTGG GAATGTGCAGTCAGAAAATATTAATAGAGTTTATAAGCACAAAGGTTTTGGATACAATTTGAGTTTCACATTTTTAAAGAGTCAAATTACATGAATTTAT TTTTCTTTTACGTCCTCTATTCTATTGTCTTCTTTTCACAAGGTTTCTGTTACCACATTTTTGTCCTTGATCAAGCACCTAACCATCACAAGTGAAATAT CAAAACAATATCAGAAGTATATGCATTTTCTTCAATGCACCTGTAGTTGTGTTGCACCAAAGCACCATTATGAGTTCCCATTACTACCATTCCCTACCCC ATAATACCTGTTTTTCACCAAATCCCATGGCAAATAATCCCTATGGCTCCTCCACCCAACTTGTCACTTCAGATCCAAGCCCTCCAATTCCCTCCATTAT GGTTCTATTTTCCGATTCTTAGCCAATTTTGAGATGCTATTCAGAGGCTACTCCCGGAGGCTCATGAAGCTTATGAACTATTCAATTTTGGATCTTGTGA GGGTGGCAATGGGGTGAAGGGTGGCCTTGTGGGTGGTAGTTTTCGACGTCTACGGGTGAGGGAAGGGGTAGGTTGTCGTGGCGCGAAGGGTGTTTTATCC TAAATGGCCACAATGAGGTGGTGTATCAATGAATCAAATCTACCTTGTACAAGTGAATCACATTCAGAGGCATCAAAATAGACAATTTTGATAACAGGTA GAATGTATGATTATGATATTTTAAAAATTGATTCTTACAAGAAAACAATTCTAGACCGGGAGAGAAGTTGCAATCACTTATCAACCTGTAACTAAACACA AGGGCTTTTGATTTTATATGAACGGACTCCTAAGTATCAGTGTTATAGTTGTAATAATAAAGAGAAAAAAATGTATGCATAGTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_39915; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_44899
| Blastp | Ran-binding protein 1 homolog b from Arabidopsis with 58.06% of identity |
|---|---|
| Blastx | Ran-binding protein 1 homolog b from Arabidopsis with 64.52% of identity |
| Eggnog | ran binding protein(COG5171) |
| Kegg | Link to kegg annotations (AT2G30060) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413072.1) |
| Pfam | RanBP1 domain (PF00638.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |