| Id Trinity | FTRINITY_DN54132_c6_g2_i2 |
|---|---|
| Name Transcript | Ll_transcript_42624 |
| Sequence | ATGAAATCATAAAAAAACATGTATCATGTTCCTAAATTTGTTTAATTTTGGGACTTCGCAACAAGTCACTACCACTACATTACTCGCGCACTACTAAAAA AGACAGATCTCGCATATTCTACGCTAACACACATAGAAAAACATAGAGATGCCAACGCCGTCGTCTTCAAGCGGCAACAATGAAGCATCGAAGAAGAAAC AGTGTTTGGGTTGGATAGAATGGTTCAGAGGTTGGTTCTATCTCATCTACGAAATGTTGTTTCAGCGAATCATGGCAAGTCACTTGGATAATCCTATGCC TCTACCTCCAATCAATGATCTCACTTGCATTGTAACCGGATCCACCAGTGGCATAGGCCTTGAAATTGCAAGGCAATTGGCACAAGCAGGGGCTCATGTT GTTATGGCAGTGAGGAATACAAAAGCAGCTCAGGAATTGATCCAGAAGTGGTCGATCGATGCTGCCGGGTTGGGTATTACCCTCAATATCGAGGTGATGG CTGTTGACCTTCTCTCATTGGATTCTGTAGCAAGGTTTGCTGAAGCATGGAATGCACGATCAGCACCATTGCACGTTCTCATTAATAATGCTGGAATTTT TTCCATCAGAGAGCCACAGAAATTTTCGAAAGATGGTTATGAAGAACACTTGCAAGTGAATCATCTTGCTCCTGCTTTGCTTTCAGTACTCCTGTTGCCA TCCCTTATTCGGGGTTCTCCTAGTCGAATTGTTAATGTGAATTCCATCATGCATCATGTCGGCTTTGTTGATGCTGAAGACATGAATCTCACATCTGGAA AAAGAAAATATTCTAGTGTGATTGGGTATTCAAACAGCAAGCTGGCACAGGTTATGTTTAGTAGTGTTCTTCATAAGCGACTCCCTGGGGAATCTGGCGT CAGTGTATTGTGTGTGTCACCGGGAATTGTCCAAACGAATGTTGTAAGTCTTTTTGAAGAATTCGAACATCTGTCTCTGAATGGGAGAGGGCATATATGA ATAATAAATATGTAACAAACTGAATATAATTTCTGCTGATGGGGCAGTTTGGTATCCAATTATTATTATTTCGAAAGAAGGCAACATAAACCTTAGGAAG TTATCTTTTGTGTCAGAAGTTTGCGCTGTAATTTTCATTTGCCCCTTGCTCATGTCTGTGTCTGTCAGCCTTGCTTAAAAATAATAATAGATGTGGGAGG GGGAAGATTGTATTTGGTGGGACACACTTTTATACCATAAGTAGACAAGTAAACAGTTTTAAATTAGCTCGGTTCACTTTGAGAGAATAATCTGGTGCAG ATTATATTGAAAAGAATGTATCTAATGAAAATTAAGGTTGGACCATTAAATAAAACTGAGGATTGCATCAATCACTGTACATAATTAGATACCTCTGAGG CTAAATGCTAAATTATGTTGACCATGATTTATTGTGTCTAATGGTTTAAATGGCTAGGCTGCTAAGGGCATGCTTGTTTTTATTTTGGAGGATTCAGAAT CCTGTTTGGGCCCTCTAGAGTTAACTGTTATAATTACCGGTCATATTTTTGTCGCTAATGGAGTAGTCATGGTTTGCGGTTTAAAATAGTTGATTTTGGA TTACGACTTAATTAAATTGTTTTTTGTATAATGGGGTATCTGTTGTGATTGATTCCTCTTTTTAGTCGCATTGTTTCATAAGCTTACTGTTTTTATGTAC TTATAACTTTATCTAATGC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_40013; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_42624
| Blastp | WW domain-containing oxidoreductase from Homo with 38.57% of identity |
|---|---|
| Blastx | Retinol dehydrogenase 12 from Homo with 34.94% of identity |
| Eggnog | ubiquitin protein ligase(COG5021) |
| Kegg | Link to kegg annotations (51741) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431398.1) |
| Pfam | short chain dehydrogenase (PF00106.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |