Id Trinity | FTRINITY_DN54134_c0_g3_i8 |
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Name Transcript | Ll_transcript_42775 |
Sequence | AACCAAATTTACACGGCCCACCCAATATCTTCGTTCAAACACGTTGCATATGAATTTCTCCATTTCTCTTCTCTTTTCCGCTGTCTCAACATTCTCGCTG ACGTTGTGCATTCTTATGATCAGACTAGACATTTGTTTGTGTTGGAAAGCTTGAGCGAACCCACATGGAAGAATACAACAGCAGCGGCACGAAGAAGGCA AGACTGCACTCGGTGTTGACAACCTTGCTAGATGACCCTGTACTTGCTGATGTCCCCAAGAACCCAACCTTGGCAGATGTTGACACTCTCATCAGCCTTG AATTGGGTAGTGCTATGCGCATTTCTATCTTCAAGTTGGATGGAACTTCATTTGATGTGACCATGATGAATTCAGCAACAGTCAAGGATTTGAAACTTGC CATCAAGAAGAAAGTAAATGACATGGAACAATCAAGTATGGGTCACCGCCATATTTCTTGGAGGCACGTTTGGGCAAATTATTGCTTGTCACACCATAAC AGCAAGCTCCTAGACGATGATGATAAGCTTCAAAATTTTGGTATACGTAATAGTTCTCAGGTACAATTTATCCCCTATGTCATGACAAAAGAATCTCGGA GGCACTCAAAGAGAAGAAAACACCGTTTCTTTCATGGCCTTAATAAGCTTTCTTGAACAAACAATTGCAAAGGTTGAGGCCATCATGTGTATAGCATGTT CTGAAGTCTTACTTGCACTAACAGAAGCAAGGTTACCTGCTGAACTTGGATATTCAGTGGTGTTTCAACTTATTTGCAATATCACTTATATTAGCTATTT TGTTGTATTACCTGATACATTGTGACACTACTTTCTGTTTGGATATACACTGTATGGAAAATTGCAAACTTTGTCCAATGGAAATCCTTCTTGTATTTCA ATTTAAGGCTGCTATCTGAAATCCATGTGTTGAGCTGCAACTACCCTCTGGGTGGCATTTAATATATTGGAGGTATAGTATAGCATTTAATATTAGTGTT AAGGAGGTATCTCCTTCTCTAGGCTGATGAGTTTGGATTTAAGCCAATCAAGTTTTGTCCTCCAATTTTTATTATTATGTAGCTCTAACATCTCATATGC TCTCCTATGTATAAGCTTGTCATACCCTCTTATACATTAATATAATGGATAAACCAATCCGGCCTTGGGTGGTGGATTAAGACTGGATTAGAGTATGATG TATAAGTGTCTTTAAAATTTCCAATCCTAAAGCCTTAGACCTGTCCCCTTGCTGGCTTGCTCCTCTATCTGCCCGCCACTAATTTGTCTGTCATTGTTGT AGTGACAGTAAACCACCATCCCAAAACCATTCAACAAGCAGTCCCATCACCCATGACCATTTGCTTGCTCACTAACCACCATCTAGGTGAATGGGAAGAA GCATACACTCAACTTGATTCGGCTTATTGAAGCCAAATGTTTTTCATGGGCACACACAGAAGGAGTTCATATACATTTCTCTGTAATAATTTTTTATATC CTATCCGGCâBLAST |
Tissue | flowers |
Gene name | LI_gene_40039; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_42775
Blastp | U11/U12 small nuclear ribonucleoprotein 25 kDa protein from Arabidopsis with 68.39% of identity |
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Blastx | U11/U12 small nuclear ribonucleoprotein 25 kDa protein from Arabidopsis with 70.15% of identity |
Eggnog | u11 U12 small nuclear ribonucleoprotein 25 kDa(ENOG4111HGM) |
Kegg | Link to kegg annotations (AT3G07860) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019454264.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |