Ll_transcript_44821

• Id Trinity: FTRINITY_DN54135_c4_g1_i5
• Name Transcript: Ll_transcript_44821
• Sequence: CTTAATTTTATAGTATATATGCAATGTTCTTATGAGCTTCCTAAATACCGGATTGTCTATGATTATTTAATTGAGTCCAACCTGAATTCATGGTGGTTCA AAGCACAAGATTTAGTTCAGTGTTCCTCTAATCTATTATGCTTCTAAACTCTATTTATATATTTTGCTCTGAACTTGGTCTTAAAGCATGCAACTCAGTC AAAAGCTTCTTCTGTTGTAGCTGCAAGTTCTGTAAAGCAGACAGGCAAAATCATACCTTATACTAATCCTCAAAAAATGAGTACAATTGGAAAATGGTTT CATCATAAACAGCATGGAAACACAAAGATGATTGTGAAGAAAAAAGATAGGACACGTTTAGAAAATGCTTGTGTGCATTCTGCTGTGTCCATTGCAGGAC TAGCTTCAGCCTTGGCTTCTGTAGCATCATCAGAGGACTATTCTAGTAACTCTCATAATACAAAGTTGAACTTGGCTCTAGCTTCAGCCACACAACTCTT GGCATCTTATTGCATTGAAATGGCTGAAGTAGCTGGTGCTGATCATGACCTTGTGGCCACTAGTGTAAAATCTGCAGTTGATATTCATACCCCTGGTGAT CTAATGACTCTTACCGCTGCAGCTGCTACAGCTTTGAGAGGAGAAGCAGCTCTAAGATCAAGATTGCCAAAAGAATCAAAGAGGAATGCATCTATTAGTC CCTATGATAAGGGCATAACACAAACTCATCGGCTTCCTGCTTTTGAGGGTCAGGTTTGGCTACACCATCCTCCATGTGAAGGAGATTTGCTGCAGCTCAC ACGAAAAAGTTACTAATGAAGTCATTCTTCGTGGGACAGTCACCAAGGAAGGACTATACACCTTTCGTGGTTTACTTCCTACTGCTGAGTCTATGTGCCT TTCAACCACTCTCACAAATCCCTCAAGTCCAGATAGTTTAACTAGTCCTATCTGTTGTAATAAATCTGTTACAGATCATAAGAATAAAAGTAGTTCAGTT TCTGCATTTTCCCTTTGGCACTCTAGATTAGGTCATCCTCATGAGGCTATTGTAAAATCTGTTTTACTGCAATGTAAGCTTCCTCATATAAATAAAACAG CTTTTGATTTCTGCTCTTCTTGTTGTATGGGTAAAGCTCACAAACTTCATGCACCATTATCACAAACTGTTTACAAGTCTCCCTTTGAACTAGTCTATGC TGATTTATGGGGACCTGCCCCTGTTCATTCTGTCACTGGGTTTAGGTACTATCTGTCCATTGTGGATGCATTTAGTAAACACACATGGATTTTTCTTCTC AAAATGAAATCTGAAACTATCACCCTATTTCAACATTTTATCAAATATGTCTAAACTCAATTTCACATTACTATTAAGTCTGTCCAAAGTGATTTTGGTG GGGAGTTTAGACCCCTCAGTACCTACTTAGCTTCACTTGGAATTACTCACAGAATTTCATGCCCACATACTCATCACCAACAAGGGACAGTTGAAAGGAA GCACAGACATATAGTTGAAACTGGCCTCACCTTGCTCAGCCATGCTCATCTGCCCATGCATTTTTGGGACCATGCCTTCCTCACTGCAATTTATCTCATC AACAGGCTGCCCTCTCCTACATTACACAACAAATCACCTCATGAACTCTTATTCTGCCAACAACCTGATTACAAATTTCTCAAGACCTTTGGTTGTGTTT GTTACCCACTGCTCAGACCTTACAACACTCATAAGTTACATCCAAGAACTGCAGCATGCATTTTCCTTGGATATTCTTCTCATCACAAAGGTTACAAGTG CTTATCCTCAAGTGGCAGACTATATATTTCCAAAGATGTCACCTTCAATGAGCTTCACTTTCCCTACTCTGCTACATTCTTCAACACTGCAGCTTCTCAA CTCAACATTGCTTCTGAAGTTCAAACTCACAGCAATCCTCTTACTCACTCAGTACCATCTACTCCTCCTTCAGTCTCTCCTTCATTATTCACTCAACATC AAATACCAAGTCATCTCTCACACTTGCCTTCTGATAACTGCTATTTTTCATCAGGTTCTCATTCTGGCAGCCCCATAATTTCCGGCACCTCTCCTCTGAT CAATCCAACTGGTTCTGAATATTCTCCATCAACTATTTCTCCCACAACCACTGACTCCTCTGCATTGACAGCTCTTCCTACTTTTCATCCAATGCAAACC AGATCCAAAACTGGTTCTCTTCCAACAGCAGTCCCTAGAGTTCTTCTTGCTAATATTGAACCAGTAAGTGCTACTACTGCTCTTACTGTTCCAGTTTGGA AGCAAGCTATGCAAACAGAGTATGATGCTCTTATGGCACTAGGCACCTGGTCTTTAGTGCCTCTTCCACCTCACAAACAGGTCATTGGTTGCAAATGGGT ATTTAGAGTAAAAGAAAACCCTGATGGTTCTATCAATAAGTATAAAGCACGACTTGTTGCCAAGGGATATCATCAAAAACATGGAGTTGATTTTAGTGAA ACTTTTTCCCCAGTTGTCAAACCAGTCACCATCAAAATTCTCCTCACTCTGGCTGTATCTCATCATTGGCCAATAGAACAGTTAGATATCAATAATGCCT TCCTTAATGGCATTTTAGATGAGGAAGTCTATATGGTCCAACCAACTGGTTTCAAACAAGGGGATAAAAATCTTGTCTGCAGATTACACAAAGCTATTTA TGGCTTGAAGCAGGCTCCAAGACAATGGTTTGAAAGATTGAAGGCCACTCTACTAAAATTTGGGTTCCAAATCAGCAGATGTGACAATTCACTCTTCTTC AACATCTCTAATAGTCATCAAATATACATCCTAGTCTATGTGGATGATATAATAGTAACTGGATCATCCTCTGCCTTGGTCAAACAAGTGATTCAAAACT TAAGCAATACCTTTGCTCTCAAACAGCTAGGCCCTTTGGACTACTTTCTGGGAATTGAAGTCAAGCACAATTCAGATGGATCTCTTTTTCTTTCTCAATC CAAATACATCAGAGATCTCTTAATCAAAGCCAATCTGTCCAATTCCAAATCAAACACAACACCAATGGCTAGTAATTGCAAACTGACCAAGCATGGATCT GATGAGTTTGAAGATCCAACCTTCTACAGATCAATAGTAGGTGCATTGCAATATGCAACTATGACAAGGCCAGACATTACATACTCTGTTAACAGAGTAT GCCAATTTCTAGCCAAGCCTCTCAATTCACATTGGACAGCAGTAAAACGCATTCTAAGGTATCTTCAAGGCACCAAGCATCTGGGCCTATCTATAAACTC AGCAAACACTCATGATTTGTCTCTCATAGCCTATTGTGATGCTGACTGGGCATCTGATCTTGATGACAGAAAATCTGTCTCTGGTGCATGCTTGTATCTT GGTCCAAACTTGGTCACTTGGTGGTCTAAAAAGCAGCAAACCATATCAAGATCCAGCACAGAAGCAGAATAT
• Tissue: flowers
• Gene name: LI_gene_40050;
• Additional information: details;

Expression of Ll_transcript_44821

FPKM

• FPAB: 1.7
• FPNAB: 0.4
• LF1: 0
• LF2: 0
• LF3: 0.2
• LF4: 0.5
• UF1: 0
• UF2: 0.1
• UF3: 0.2
• UF4: 0.4

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_44821

• Blastp: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 35.07% of identity
• Blastx: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 39.82% of identity
• Eggnog: -
• Kegg: -
• CantataDB: Link to cantataDB annotations (CNT0002682)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019414575.1)
• Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) (PF07727.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;