| Id Trinity | FTRINITY_DN54145_c5_g3_i5 |
|---|---|
| Name Transcript | Ll_transcript_42596 |
| Sequence | AAGAATTGGTATATGATTACAAACATTACATACGAGCCTGTAATAACTCCGAAGAAACAGCCACTAACACAGCGAGTTACTCGAACTAAGTCTACAAATT CGAATCAAACACAAACCCTCTCTGTTCTCGATTCCATTCTCATAAAACTACCATGCCTAGGGTTCCGGCGACTCAATCTTCTCCTCCTTCATCTTCAATC GCTTCCACCATCGGAGCTTACGCTCTTCCTATCATTCTCTTTGCCGGAGCGTTATACTATCAGCTCGTTGTCATTCCCAATGCATTTCCTCCTTCTCATT ACGACGTGTTGCAAATTGATAGGTATAGTTCGGTCGAGAAGGTGAAGGAGGCTTACGATAAAATTGAATCTAAATGGAATTCAGCTGTGGAAGCTTCTGA TAGCCGTGAGTTTGTAAAGATTCGATATGCTTATGAGTTGCTGACAAATCCTTTATGGAAAAGAGACTATGACATATTTGGCATTGATGAACAACTTCAT ATTATTGAGAGTGCTAGCAAGCATTACGCTGGGAAACGTGTTTCAGAACTGGACCTCCCTTTACTAGACCTCCCCACTCCTGGGTCCATTGATCATTCCT CTGAAGTCATTACCACAAGTGACTTCAGGTCCATATTGCCAGATGCAAAACCATGGCTAATTCAGTTGTATTCATTGGGGAGCAAGCGTTCTGCCCACTT TTCTGCGTCCTGGAATAAGATTGCTGCTCTATTGCATGCGTTCACAAATATTGGTGTGGTGGAACTTGGTGAGGTGGAGCTTGCTGTATTCCTTGCTGAT AAAAGATCATCAGGAAAACCATTTTTCAGAAATGGAATTCCATCCGTTGTTGCCGTTCCTCCTGGGTGTCATGCTGCAAATTGCTTAAGAAGGTTCCATG GCGAGCTAAGTGTTGACACAGTCACAAATTGGTTTGCAACAACTGTATTAGCTTTACCTCAAATTAAGTACTACTCAAAGGAGTCACTGGTAATTTGGTC AAACTCTATAGGATCTTGCTCTTTTTCCTAATTATGTATGCTAATGGCAGTGTTCTTTTGTACGTTTCTGTAGCAGTGATGTGAAATAAGGAAGTTTTTA AATATGGGGGTGGCTGTCGTTAATTAGGTTTTAATGTCTACCCTCTAATCCCCCTTCTTGTTGAATCAGTCAATCACTACAGAATAAGCTGAATGTAGTG TTTTTTATACCTTACCAAAACAGCTTAGCTCTGTAATTATGGTCATCTGCTTTTGTAATTCGAAGTAAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_40132; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_42596
| Blastp | Chaperone protein DnaJ from Bacillus with 40% of identity |
|---|---|
| Blastx | Chaperone protein DnaJ from Bacillus with 40% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (ABC1660) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417268.1) |
| Pfam | DnaJ domain (PF00226.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |