Ll_transcript_44163

• Id Trinity: FTRINITY_DN54154_c0_g1_i3
• Name Transcript: Ll_transcript_44163
• Sequence: TTATGACTTACTCTGTAGAATATGAAAAGTTACATAAGAACTGTGAGTCTATGAGTGTTGCGACAAAAGTGGAAACATGAAAAAAGAAATAATGTGAGGT ATATGGTTCAGTTACTACACCGTTGTTCGTTGCTCCCCAAATTCATACTTGTCATTTGATACAAACTGAATCCCCATGCCTCGCCGCAGTAAGTGGCAAC GGAACCCGCCACCCACCGTCAAAACCATTCAGGTGGCTACTGTTCAGAACAGTGACGGTTCGTGTTCGGAAGAAGGGCCAGAAACTACTGAAGATGATTC AGGAGTAAGTGATTATTCCGATCAAACTAAAGTTGGTAGAAAGAACCCATTTAGAAAGAGCAATGATGAGAGTTTGAAGAATTATGAGTCCAAACATAAC CTTGAAGGAAATAAAGATGGGTTTTTGATTAAGAAACGTGGTAGAAAAAGAAAAACCCTTTACAAATGTGAAGCTAGTGATTCAAAGGTAGAAGATCAAG CTAATGGGGAATCTCAAAACCCTTCAGAAAGCACCTTTCAGAGACGTAGCTTAAGAAATCTTCCTGGACCAAGTAATAAACAGGATATGCCAAAAATGAA GAGAGGTGTTAAATTTACAGAAGAAAAATGCCTAATGTGCCATCAATGTCAGAGAAACGATAAAGGCGATGTTGTGAGGTGTAAACGTTGTAAGAGTAAA AGATATTGCTTGTTCTGCTTGAAAAGTTGGTATCCTGAATGGAAACATGATGATGTTACTGAGGCATGCCCTGTGTGCCGTGGTAATTGCAATTGCAAAG CATGCATGCGGTCTTTTGCACATATTAAGAAAATGAAGAGAGATGTGGCAAATAAGAGGTATGAAGGTAACGAAGCTGATCTCTCTAAGTATGTACTGAT ACGTCTCATTCCATATGTAAGACGATTGAATGAAGAACAGATGATTGAGTTGGGGATAGAAGCTAAGAGACAAGGACTCTCAATCTCAGAGCTTAATATT GAAAAGGCAGAATACTCACTGATGAAACATGTCTACTGTGACAACTGCAAAACATCAATATTTGATTACCACAGAAGCTGTAGAAAATGTTCTTTTCACC TTTGTCTCACCTGTTGCCATGAGCTTCGTGACGGGCAGCTTCTAGGTGGTCCAGATCCAGTTGAGTTGGAGTTCATCAATTGTAGTCTCGAGTATTTGTG TGGTGGAAAAGAAAAGGAACAGGTAAAAATGAAACGCACCCGTGTTGATGCTAAGCCTGAGATACACAAATCACCTGCTGGTGCTGAGCCTGACATTCGT GGATGGTCAAGATCTGGGTGGCATGCAGAAAGTGATGGTAGGATTCCCTGTCCAAAGATGAATGATGAATGCTGCCATGGTCTTCTTGAATTGAAAAGCA TATTTGGCCAGCCTTTTATTTCAGAGTTAGTATATAAAGCAGAAGAACTAGCAAAAGCATATACACTTCAAAATGCAATCGAAACTCCTGACAACTTGTG TTCTTGTCTGAAGATCAGTAGAAACACATATGTTAGAAATAATATAAGGAAGGTAGCTTCTCGTGAAGTTTCCAGTGACAACTGGTTATACTGTCCTAGG GCTGTGGATTTACGACCGGTTGATTTAAAGCATTTTCAATGCCATTGGAATAAAGGGGAGCCTGTCATTGTCAGCAATGTGCTTGAGTGTACATCAGGTT TAAGCTGGGAGCCACTAGTGATGTGGCGTGCATTCCGTCAAATTAGTAATACCAAGCATGGTCAACATTTGGACGTGAAGGTCTTGGATTGCTTAGATTG GTGCGAGAAAGAGATCAATATCCACCAATTCTTTATTGGGTATACAAATGGTCGTTATGATTGGGTTAAGTGGCCTCAGATACTGAAATTGAAAGATTGG CCTCCGTCTAATTTATTTGAGGAACGTTTACCTCGTCATTGTGCCGAGTTCATATCTTCCTTGCCCTTTAAAGGATATACAGATCCTCTCGGAGGTGCTC TTAACCTCGCTGCTCTTAACCCCTCTTCTCTTCCATGTGCAAAGGCAGACATGGGGCCAAAGACATGTATTGCTTATGGAGTTAGTCAGGAGCTTGGACG TGGTGACTCTGTGACTAAGCTTCACTGTGACATGTCTGATGCAGTAAATGTGTTGATTCATATTGCCAATGTGGAATTGGTGCATAGTAGTCTCACTGCC ATTGATAAGTTGAAGCTAAAACACCTCGAGCAAGACAAGAGGGAGCTACTTCGAGATGATCAGGAGGGAGAAGGTAGTGATGGGGTGCGTAGTAGTTCAT CCTCTACTGTAGATGGTCTTTCATATGGGTCAGAGTTGAAAGACGATGAGAAAGTCAAAACGAAGCAAGAAAACAGTATGTTCAACGGGAAGGATGCTTC AGATGGTGCTCTCTGGGATATTTTTCGAAGACAGGATGTACCTAAATTGCAGGAATATCTGAAGAAGCATTTTAGAGAGTTTAGGCATGTCCACTGCCGT CCTGTAAAGCAGGTTATTCATCCCATCCATGACCAGACCATGTATTTGACGCTGGAGCATAAGAGGAAGCTAAAGGAGGAGTATGGGATCGAGCCCTGGA CTTTTATTCAGAAGTTAGGAGATGCTGTTTTAATTCCAGCTGGCTGTCCTTACCAAGTCCGAAATCTTAAGTCATGCATCATGGTTACACTTAATTTTGT CTCTCCTGAAAATGTTGGTGAGTGTTTCCGTTTGGCGGAGGAATTTCGCACACTTCCAATAAATCACATGTCTTCAACGGACAAATTGGAGGTTAAGAAA ATGACAGTACTTGCGATGCATAAAATGGTTCAAAAAATGGAGACAGCAAGTTTAGCGAATGCGAGTTTCAAGCCTTGTGTGCATCCAATGCGAGATGCTG ATGTTACACTTTCAACTTCGAAAGAGCAAGAGAAGAAGGTTCAAACCCCTGCAACAGTTGTTGAAACTTTTGTGCAGCCCAATCTTTCTTCAAAGGAAAG TAAATCTTTCGTCACCCCCTTTACTTCAAACCACTCCTCTCTCAATATGGAAGTTGCTGAGGATGAAGTCATACGATCTATTCAAGCTCCTGAGGCTGAA CTTTCCAGGCGAGATTTGATCAACCAGGTTGTTGAAACATCTTCTGCCTCCCTTGACCAAACTGTCATAAAAAAGGGGCATATGGTTCCTCCAGCTCCTC TATGGGACATGGTTTATGCAGCTATGGATGAATCCCTTCAATTAGAGCCTACTATCAAGGCTCTGTCAGATGATGCTGCTGGCCTCGCTCCACATTCTCC TTCAGAAAGAACTGAAAATCCTATTGTTCCTGGATATGATCCATTGGCTGAGCTGGACAGCATACTCTCAGGCAGTAAAAAACTTTCCCCCAAGTCTGGA AAGTCATCTACCTGCACTGGAGAAGACTCTAGAGAATTCAAAGTTATCGAACACCTTGAATACCTTAAGTCAGCCATCTCTTGCCCGTTCAACCAGTTAG CTACTGAGAAGAGCCTCCAGGAGCGCCTCTACTCTCTCCTTGGCCAATTGAGCAAGCATTCTGCCAGCCTTCCTTCATCGCTTCGACAATTGCCCATCCT TATGAAGGCATCACTCGGAGACCTAGCTGTTCAGTATCCAGCACTTCGAAGTACCATTGAGTCTCAAGAAAGGAGACTGAAAGATAAAGAGGAATATTCC AAGCTGTTGGTCAAAACTAAGAATCGTCGAATTGATCTTGATACCAACATCAATAAAGGCAGTGTCGAGATGTCCTCTCTGGACAAGCAAATTGCTAACT ATAAACAAAAGCTCATTGAAATGGAGGCCCAGAGAGAAAAGATCCACGCCTACCTTGTCAAACACGAAGGAGAGAAGAAGAAGCTAATGGAAACTGCTGA CATCTGGGTGGAAGAAGCAAGAAGAGTTATGTCAGCCATCAACGAGGCCACCAAGGACTATGATGAAGCCCTTTCGACTGAAGCAATCTATGCTCAGATG TGGGAAGGCTTCAAGAAAACCCTGGCTGATGTGAATTCTGCTTGAACTTATCTGTCAAAGGGCCAAGGAAACCAAGATTCCCACCGTAAATGCATCCCTA ACAGATTGAAGCTGATCCAAAGTATAGGTTTTTTGAGCCATTATCTTGATGGTCTTAGGTTCCATATATCCTGACTGTAAGAACAGCTTCATATTTTTGT TTTCTGTTGCACTCTTGTATGAGGCATTTTCAGAACATAATATACTAACCTGTGATGGTGTGCATGTTTGTACCACTTTCTTATCTAGGGTGCTTGTTCT TAGGCTTAATCATGTTTATGGCAGATGCTAACTTTAGCATTGTACTTTTTGAACTTCAGAATGTATAGATGATGATGTTTTAAGTTACCCTTTTTGCATT ATATTTGGCAAAGTATTGTTTAGATTGCTGTATTGTTTTTGCAACTAAAACTTTCCAAATAGAAAAATGTTTATAAATATGCAAATACAGTTCTTGGATC A
• Tissue: flowers
• Gene name: LI_gene_40203;
• Additional information: details;

Expression of Ll_transcript_44163

FPKM

• FPAB: 2.7
• FPNAB: 3.2
• LF1: 2.3
• LF2: 2
• LF3: 2.6
• LF4: 2.4
• UF1: 2.2
• UF2: 2.1
• UF3: 2.9
• UF4: 2.6

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_44163

• Blastp: Lysine-specific demethylase JMJ25 from Arabidopsis with 46.6% of identity
• Blastx: Lysine-specific demethylase JMJ25 from Arabidopsis with 45.83% of identity
• Eggnog: lysine (K)-specific demethylase(ENOG410XTAA)
• Kegg: Link to kegg annotations (AT3G07610)
• CantataDB: Link to cantataDB annotations (CNT0001036)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441692.1)
• Pfam: Zinc-finger domain of monoamine-oxidase A repressor R1 (PF10497.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;