| Id Trinity | FTRINITY_DN54154_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_44164 |
| Sequence | TGAAAAGGCAGAATACTCACTGATGAAACATGTCTACTGGTTGGGATGTGTTTGATTTCTTTTGTTTTTTCAGTTATACTCATATTATTTAGTTGCTGAC TTAATGCTGTTTTGTAGTGACAACTGCAAAACATCAATATTTGATTACCACAGAAGCTGTAGAAAATGTTCTTTTCACCTTTGTCTCACCTGTTGCCATG AGCTTCGTGACGGGCAGCTTCTAGGTGGTCCAGATCCAGTTGAGTTGGAGTTCATCAATTGTAGTCTCGAGTATTTGTGTGGTGGAAAAGAAAAGGAACA GGTAAAAATGAAACGCACCCGTGTTGATGCTAAGCCTGAGATACACAAATCACCTGCTGGTGCTGAGCCTGACATTCGTGGATGGTCAAGATCTGGGTGG CATGCAGAAAGTGATGGTAGGATTCCCTGTCCAAAGATGAATGATGAATGCTGCCATGGTCTTCTTGAATTGAAAAGCATATTTGGCCAGCCTTTTATTT CAGAGTTAGTATATAAAGCAGAAGAACTAGCAAAAGCATATACACTTCAAAATGCAATCGAAACTCCTGACAACTTGTGTTCTTGTCTGAAGATCAGTAG AAACACATATGTTAGAAATAATATAAGGAAGGTAGCTTCTCGTGAAGTTTCCAGTGACAACTGGTTATACTGTCCTAGGGCTGTGGATTTACGACCGGTT GATTTAAAGCATTTTCAATGCCATTGGAATAAAGGGGAGCCTGTCATTGTCAGCAATGTGCTTGAGTGTACATCAGGTTTAAGCTGGGAGCCACTAGTGA TGTGGCGTGCATTCCGTCAAATTAGTAATACCAAGCATGGTCAACATTTGGACGTGAAGGTCTTGGATTGCTTAGATTGGTGCGAGAAAGAGATCAATAT CCACCAATTCTTTATTGGGTATACAAATGGTCGTTATGATTGGGTTAAGTGGCCTCAGATACTGAAATTGAAAGATTGGCCTCCGTCTAATTTATTTGAG GAACGTTTACCTCGTCATTGTGCCGAGTTCATATCTTCCTTGCCCTTTAAAGGATATACAGATCCTCTCGGAGGTGCTCTTAACCTCGCTGCTCTTAACC CCTCTTCTCTTCCATGTGCAAAGGCAGACATGGGGCCAAAGACATGTATTGCTTATGGAGTTAGTCAGGAGCTTGGACGTGGTGACTCTGTGACTAAGCT TCACTGTGACATGTCTGATGCAGTAAATGTGTTGATTCATATTGCCAATGTGGAATTGGTGCATAGTAGTCTCACTGCCATTGATAAGTTGAAGCTAAAA CACCTCGAGCAAGACAAGAGGGAGCTACTTCGAGATGATCAGGAGGGAGAAGGTAGTGATGGGGTGCGTAGTAGTTCATCCTCTACTGTAGATGGTCTTT CATATGGGTCAGAGTTGAAAGACGATGAGAAAGTCAAAACGAAGCAAGAAAACAGTATGTTCAACGGGAAGGATGCTTCAGATGGTGCTCTCTGGGATAT TTTTCGAAGACAGGATGTACCTAAATTGCAGGAATATCTGAAGAAGCATTTTAGAGAGTTTAGGCATGTCCACTGCCGTCCTGTAAAGCAGGTTATTCAT CCCATCCATGACCAGACCATGTATTTGACGCTGGAGCATAAGAGGAAGCTAAAGGAGGAGTATGGGATCGAGCCCTGGACTTTTATTCAGAAGTTAGGAG ATGCTGTTTTAATTCCAGCTGGCTGTCCTTACCAAGTCCGAAATCTTAAGTCATGCATCATGGTTACACTTAATTTTGTCTCTCCTGAAAATGTTGGTGA GTGTTTCCGTTTGGCGGAGGAATTTCGCACACTTCCAATAAATCACATGTCTTCAACGGACAAATTGGAGGTTAAGAAAATGACAGTACTTGCGATGCAT AAAATGGTTCAAAAAATGGAGACAGCAAGTTTAGCGAATGCGAGTTTCAAGCCTTGTGTGCATCCAATGCGAGATGCTGATGTTACACTTTCAACTTCGA AAGAGâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_40203; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_44164
| Blastp | Lysine-specific demethylase JMJ25 from Arabidopsis with 48.3% of identity |
|---|---|
| Blastx | Lysine-specific demethylase JMJ25 from Arabidopsis with 47.31% of identity |
| Eggnog | lysine (K)-specific demethylase(ENOG410XTAA) |
| Kegg | Link to kegg annotations (AT3G07610) |
| CantataDB | Link to cantataDB annotations (CNT0001036) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441692.1) |
| Pfam | JmjC domain, hydroxylase (PF02373.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |