| Id Trinity | FTRINITY_DN54155_c8_g5_i1 |
|---|---|
| Name Transcript | Ll_transcript_43848 |
| Sequence | AGACACTCTAAAGATGGAGATTTATGCTTGCTATGGCAAGAAGATGCAACATCTTTGTAGTGCTTCATGTCAAAATATAAAGCAACTAACCAAATCAATT TTTTTCCTAGGTGCGTGCTTTTGCCGCTTCATCCTCCGTAGTGCAAACCCACTGTGGGTTCAGCTTTTCTATTTCATCTCTCTTTCATTTTTTGGCTTTG GTGTTCTCAAGGTTCTAAAGCCTAGAACATCTTTTACTCCTACAACTTTAGATTTGTTCTTCACCTCCGTTTCTGCCACTACAGTTTCTAGCATGGCCAC GGTTGAAATGGAGGTTTTTTCTAACCCCCAACTTATAGTTATGACCATTTTGATGTTCATAGGTGGTGAGGTTTTTACCTCTATGATAGGGATCCATTTT ATTAGGTCCAAGTTCAAAACTGAGTTGGATAAAATAGCTTCTTCACATAGCCGTCTTAGTACTCCAAACCAACCCATTATTCTTGATCAAATTGAGTTAG AAATAGTCACAAAATCTAGTCCAGATAATTCCAAACTTGAGGAATTTTATGAGTCTTATTTGGGTTCTACAGATAAAAACTTGAGGTATTTATCTATGAA ATATTTGTTTTTTGTAATTCTAGGTTACCTTGTAGTTATCCATGTTATAGGGGTCATAGGGGTGTCCCTTTACCTTGTTGTTATTCCTAGTGCTAAAGAA GTACTAAAGAACAAGGGTCTAAAAATGTTTACATTTTCTGTTTTTACTATAGTTTCAACTTTTTCAAATTGTGGCTTTGTTCCAACAAACGAAAATATGG TTGTTTTTAGCAAGAATTCAGGTCTCTTACTTATGCTTATTCCTCAAATCCTTCTAGGGAATACACTGTACCCTTCATCCTTGAGATTTATTATATGGGT TTTGGGTAAATTTTACAAGAAAAAAGAGTGTAAGTACCTTTTGAAGAATACAGAAGAGGTTGGGTACAAACACTTGCTTCCAAGACAACACTCTATGTTT TTGGTAGCAACTGTTATTGGGATTGTTGTGGTTCAAGTAGTGTTGTTTTGTTCAATGGATTGGAATTCAGAAGCATTGATGGGACTGAATAGATATCAGA AATTGATTGGAATAGTGTTCCAATGTGTGAATACAAGGCATACAGGAGAAACCATTGTGGACCTTTCAATTATATCACATGCCATCTTGGTATTATTTGC AGTTATGATGTTAGTCTCTATTTCTCACACTCTTCGTATTATATTATCTGCATATTTACAAATTCAACACCAACATCTTAAACCGACAATTTTTTAAAAT ATAAATATTAGTATATTAGTATTTTTGCACATGCTTTAAAATGATCAATGGTTTATTGGTTATATAAGAAGAGGTGTGAATAAAATGTAAGTGATATGAT AATATTACAATATTACTTTGAAACAGTAAATCTTTAACAATAAAATGAGGCAAGCATTCTTGTTTTCTATACATTTTCCACTATAATGTTTCAAGTAGAA GCCATGCAGTATAATAAAAAAAATAAATTGGTACTTGTATAATATTTTTATATGCCACACTCATATTAATTGTGCAAAATACTTATAAGAAAAAGCTAGC AAAACATTTTATTTTGTTTTATTAGGTCATATTTCAGTATTTCACACACTTTCCTAGTTCTAGCTTGTATTTTTAAGGAGGGTGTGAGAACTGAACGATA TTAGCAGTACCCTTGCACGTTTCAACATTTAAGAATTGCATTATTATTACTGTTGTGTTGCTGTATCTTGTTGACGAAAAAAATGATAATTG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_40226; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_43848
| Blastp | Sodium transporter HKT1 from Arabidopsis with 47.76% of identity |
|---|---|
| Blastx | Probable cation transporter HKT6 from Oryza sativa with 48.04% of identity |
| Eggnog | Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA (By similarity)(COG0168) |
| Kegg | Link to kegg annotations (AT4G10310) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019457352.1) |
| Pfam | Cation transport protein (PF02386.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |