Ll_transcript_44937

• Id Trinity: FTRINITY_DN54163_c0_g1_i1
• Name Transcript: Ll_transcript_44937
• Sequence: GTCAACAGGTCAAGTGGTGCTGTTATAGATATGTGGATTAAGGCAAAAGAGCTGGAGGCAAATACTGAGTATTACATTGAGTTGTTAGCAAAAGGAATAG GAAAATCAAAAGAAGAAATTGCTAAAGATGTCCAGAGGCCTAAATATTTCCAAGCACAGGAAGCCATAGAGTACGGTATTGCCGACAAAATCATTGATTC AAGGGATGCTACATTTGATAAGCGGAATTATGATGAAATGGTTGGTCAATCAAGAGCAACAAGGAGACAAGCTGGTGGCAATCCTCAAGTTGCTCCAACA GGATTTAGGTAATCATACAAAGCATGGATTCACTTATTGTGCTTCAAATCCAATGCCTTAAAAGGGTCTTGTTGTCAGGCATCAATCTTGTTCTTATATA AACAAGGCCAAATGGAATAAAATCCTGATAAGTGTATAAGCTTTGTACCTTGGTTCTCGGCGTAGTTTGTAGTATACTTAAATTGAATTACTTATGCTTA GTTTCAACAACTAAAGAAAATGACCAGGGCTCAGGGATTATTTTCTTTTGTTGTATATACTGAACTGTTACCGATACAACAGACTTCATAAGATCACTGC ATTGTCTACAACACTCCTTTGTTTCATTTTTTCCTTTATGACATTTTCATTTTCTCTAAAGTACCTTCGAGCACACACTCCCCCCACATTTTCCGATTTC ATTGCTCATTACCTTGCATCCAACCATGAGTAATTTTGTTGTAGTTATCATTATTTGCTTTTTTTATTTCTATTTTATTTATTGGCAATGCTATATTTGT TGAGATTCGATAAAGTTTTATGTTGGTTATTGACTCCTAACACAACATTTATTTTTTACTTAGACTTCACCCTAGTTATGTATAGCGCCATTTTACCCTT GTAGTTGACCTGTCATATGATCGGAAAAGGTTTAGTTCTGCGTTGAAAGCCACATTTACATTGATTGGATTCAAGCTAGTTATTCAATCACAGATATGTT GGCTTCAATGGCGGAGGCTGCGTCTTTCCATAATGCTGACTCGGAAATTGAGGTTGATGCACAACACAGGTGATTAGTCATCTTTGGCTTATCAATTTCA GTTTACTTAACAACAGAACTATATATTCACTGAATAGAAAAGCCATTTCTTACTGCAGTTTGTATCTATAAATTATATATACGAGCATTAAGTATACCTA GGCTAAGAAACACAACCGAAATCAGTGTATCCTCCATGGATTCTATTATCTATTTTTTACGCTGAATCACTTTGTCCGAACTGCGTTGTTTGTTATGCAT TTGAAATGTGGCTGTTTGAATCTAGCATATCAGTTGTTTGATCAATTGCCTGAGAGAGAGATATACATTTTGCTACAATGACACGATTGGAGGACTTGCA ATTCATGGATGATTATGGTTACCATGTTTGCGTGTTCTCATGTTGGGTTGGTTGAGGGTTTGTAAATTTTAGAGTCAATCAAGGAGGTCCATGCTATGGA ATCAAAACTTGATCCTTATGGAATGCGTAATCGATCTTGGTCGAGCCGCCGGGAAATTAAAAGAGGCAGAGATGAGATCACAAGACATGCGTATGAAACC GAAAGTAGTTTTAAGAAGGTCTTTACTAGGAGCAGCAAGACTTCCTTCATGGCAATGTAAAGATATGAGAAACTTATCCATTTTATGAATAAATATATTT GAAGATTGGGGAGATAAATGCAAGAGTACAAAAATATGGTTACAAGCCAAGAACATGAGATGTATTGTATTCTCTAATTTATAAGTAAGCAGATGAATAC ATGAGATGTATTGTAGTTAAGATGCATTTCAACACAATTCGCTCCAAATGGGAATTCACTAGAACTATAATCAATCGAAATGAATCTTAATTTCAGCGCT ATAGAGATGTTTTTATTTATTTATCTCTTATTCATGAAACACCCAGCATTAAATCAAAAGTTTGGACTTTCGCTGAGTCGAGCTTAGAAGATTCAAAATC AAGTGGATAAAACTTTACCAATACTTTTTATTTTAAATCCGGCAAGTAAAACATTGCCTGGGGAACCTTGTTACTAGGCAATATGCATAGATATAAGTAT ATACGTATCATTTTTTCTATATTTATTTTTGAATAAAAAGATGTATGTAATAATAATGTATGAGTTTTATACATTATTTTTGCATCATTCAGTATTTATA TTTAATCATCACTAACTCTTTCAGAAAATAATCTAAATTAATATTATAATTTTTATTTTGATAACAAATAATAGATTGCAAAAATACAAACTTAACTGGC TCTATAACAAAGCCCGGGGTTACGCTTACGCTCCGTCTTTCTAACCCGGCCCACGAATAATATTTTGGTTTAATTTGTGTCCCGTTCTGGAATTAAATAA GAAAAAGAAAAAAGACTCAACCTATTATTATTATTATTATCAACAAAAACACAATCTCTGA
• Tissue: flowers
• Gene name: LI_gene_40279;
• Additional information: details;

Expression of Ll_transcript_44937

FPKM

• FPAB: 31.2
• FPNAB: 1.7
• LF1: 2.7
• LF2: 3.5
• LF3: 3.2
• LF4: 2.7
• UF1: 2.5
• UF2: 4.7
• UF3: 3.6
• UF4: 5.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_44937

• Blastp: ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic from Arabidopsis with 69.9% of identity
• Blastx: ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic from Arabidopsis with 69.9% of identity
• Eggnog: Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (By similarity)(COG0740)
• Kegg: Link to kegg annotations (AT1G49970)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428782.1)
• Pfam: Clp protease (PF00574.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;