| Id Trinity | FTRINITY_DN54179_c1_g2_i15 |
|---|---|
| Name Transcript | Ll_transcript_43273 |
| Sequence | AACCTCTTTTTATTCCCTTTTCTCAAAATCAATTAATACATCTCATTCTTTACCCTAATATTTGTAATTCTATCTTTTGTTGCAGATCGGTGGTTGTAAT TCAATAACATGGCTTCTTCAGAAACACCTTCTCCTTCTACACCTATTACTTCTGCTCCTACAGCTCCATTTTCTTACAACAACATGCCTCAAAATGTTAT CAACACTTCTCATCACTCCTCTACATACTCGGTTGTTCAACATCCACTTCCTGCTATGTCGTCGCATCCTGCTCCTTCGTTTAAATTCAATATTCCCCAA ACTGGTCATGCCTTTTCTAGCAATCACCATCCACAATCTAACATGAACATGTCAGATTCTGTTGCACAAGATGTTAATAAAGTGTCATCTGCATCTAGTA TTCCAAATTCTGTCCCCCCTCATTCTTCTAATCCTACACGTCCAACTTATGACCCTAACTATCGGCCACCTACTTCATGGATGCCATCTGCCCCATCTTT CCCTATGCATCATGTTATCCCTGGAACTCCAGGGAACCCTGCTCCGCCTGGATTAACACCCGCTCCAGTAATATCCTCCAATCTATCTGCTCCATCCATA AGCTCAGATTCTTCATCAGCTGCAGTTCCAAGACAGAATTTGCCAAGTGCAGCCATTGCATCAGATCCTACTCTCCAGCAGAAGGGCACACCCTATCCAT CCATACCAGTCATGGCCGCTTCCCCTCAGGGACATTGGCTACCACCTCCACAGATCAGTGGCGTACTCAGGCCACCTTTTCTTCCATATCCTGCTGCCTT TCCTGGCCCCTTTCCATTTCCAGCACGTGGTGTTACTCTCCCTGCTGTTCCAGTACCTGATTCTCAACCTCCTGGTGTTACTCCAATGAGTGCTGCTGGC GCCACGTCTGCATCTCCTGCTTCAAGTCATCAGTTGAGGGGAACAACTGGTTTTCAGACAGAAGCGATTCCAGGGCATGCTGATTACAAGAAAACATTGA ATGTGACACAGAATGAGAATCCTGCTAATGATCAATTAGATGCCTGGACAGCCCACAAGACTGAAGCAGGAATTGTATACTATTATAATGCCTCAACAGG AGAATCAACTTATGATAAACCTGCTGGCTTTAAAGGGGAGCCTCACCAAGTTGCTGTACAGCCGACTCCAGTTTCAATGGTGAACTTGCCTGGTACTGAT TGGGTTTTGGTCTCCACTAGTGATGGGAAAAAATATTACTACAACAATCAAACCAAGACAAGTTGCTGGCAAATCCCGAATGAGGTAGCTGAATTGAAAA AGAAACAGGATGGTGATGTTAGAAAAGATCATTTAATGTCAGTTCCAAATACTAATGTATTGTCTGATAAAGGACCTGGAATGGTTACTCTGAATGCTCC TGCTATTAATACTGGTGGTCGTGATGCTGCAGCTCTTAAACCCTCTAGTGTGCAGAGCTCATCATCGGCACTAGATTTGATCAAGAAGAAGTTGCAGGAC TCAGGAACACCTGTTGTCTCCTCTTCCATTCCTAATTCATCAGTAGGATCTGAATCAAATGGTTCAAAAGCAGCCGAGTCTACAGCTAAAGGCCTTCAGA TTGATAATAACAAAGATAAGCAAAAAGATACTAATGGTGATGCTAATGTCTCTGACACATCCTCAGATTCAGAAGATGAAGATAGTGGGCCTTCAAAGGA GGAGTGCATACTTCAGTTTAAGGAGATGCTTAAGGAGCGTGGAGTGGCGCCATTCTCAAAGTGGGACAAAGAACTACCAAAGATAGTATTTGATCCACGT TTTAAGGCTATACCAAGTTATTCTGCTAGGAGGTCCTTGTTTGAGCATTACGTTAAAACCCGTGCGGAAGAAGAACGCAAAGAAAAACGTGCTGCACAAA AGGCTGTAATTGAGGGATTTAAGAAGTTACTGGATGAAGCCTCAGAGGATATTAATCACAACACTGATTATCAAACGTTTCGTGAGAAATGGGGAGATGA TCCACGGTTTAAGGCATTGGACCGCAAGGAACGGGAGCACTTATTGAGTGAAAGGTGCCACTTAGTATTTTAGTTAGCTATTCTATTTAGCTTTCACTGG TAGTATTAGTTGCATGTGAGTGCTCATATAGCAGCTTCCATTCCATCATATTACTCATTTATTCTTCAAGTTTCTCACCTGCCATTTGATGTTTTTTTCT GGAAGTTTTATGGCTGGGAATCTTCAGTTCCATATGTGGCATGTGTAACATGAAAATTTGACATTTCATTTTCTTCTTTCATTCCTCGAGTTTTCTGGAT TGTTTATCATGTACATTGGACATACAAAATATAGAAGACCAGCATTTATTTGGTTAAAATTATCTTAATAGACATGTTTCTGAATTAATCATGATTGTAA TGTATCCTTAAGTGGCAAACAAATTTTGGAGCTATTGTATTCAACCTGAGGAGAGAGGGATTTATCTATAATGCAACCACCGTTTTGATACAGCATCATG TGACACATTTGAGTTTTGTTTGTCACATGAATGCTTTCTATAGTTTTCAGGGTTGATTGTGTTAAGGGGAGAGAAACATTAAAGTCATCCATGTTTCAGG CTTTCAGCTTAAATTGGTACAGTGGATGGGAAATAATTTGGTTGAAAATTTGATATGCAATACTTGCTTGGTGGTTGATACAGCAAAAATTACATTTGTT TGAGAATGAGATACATTTTTGTTTCAATTTTCACTCTCTATAGCATCTGCAAATCATCTAGGACTGAAATCGCAATTTTGCATATGTTACACTTACACCC TCTTCATATTCCTTCTCTTCGAAGCATACATTAATTGCAAGAGAAGGGCATTATGTTACTGCTGCCCATTTCCCTTTAACAAAACTGCATAAAGGTAAAG TAATAGAGACATGTTTGTTGAATGTGGGTGTTCACAATTTTATATTTTAACAGCATCAGCAGAAGCTGACCCCACTTTGTGGGATAAAGGATTGGTTGTA GTTTAACAGCATCAGCACATTTGCTGCATGCAACAACTTGTCCAATAATGGATGCCTTCTTTTTAGCCAATCCTATTGATTTTATTAATTAAAATTTAGC ATCAGACTGAGCTAAGTTCTTTACCTTTGTGTGTATAGATATTGCTATGGTTTGGATCCTCATTCGCATAATATTGAACTTTTTGCTAGACAGAAATGAT TTCTAATGATAATCCTTGAATGCAACATGAGTCAGCAGGTAGTAGGCTAATGACAGACTCCCGGATTCACTGTGGGTGTGTCCTTATGTCCTCTGAACTC TTTGGATTTGCATGGTAAATGTTTTTTCTATGTCAATGTGATTTTTTTAGAATGCTTGTTGATGGAGTTCCTGTTTGTGTTTCAGAGTGCTTCCTTTGAA GAAAGCTGCCACAGAAAAGGCCCAAGCAATGCGCGAAGCTGCTACTTCAAGTTTTAAGTCATTGATTAAAGAGAAAGGAGATATAACTTTTAACTCCCGT TGGTCCAGGGTTAAAGAAAGTTTAAGGGAAGACCCAAGATATAAATCTGTGAGGCATGAGGATAGGGAGATTTTGTTCAATGAGTATATATCTGAATTAA AAGCTGCTGAACATGCAGCAGAACGAGAAACCAGAGCCAAAAGAGAGGAGCAGGACAAGCTGAGAGAGAGAGAACGGGAGCTGCGCAAAAGGAAGGAAAG AGAAGAACATGAAATGGAAAGAGTGCGGCTAAAAATTCGAAGAAAGGAGGCAGTGGCTTCTTTTCAAGCTTTACTTGTGGAGTCGATCAAAGACCCTCTG GCATCATGGACGGAATCAAAGTCTAAATTAGAAAAGGATCCTCAAGGACGTGCTGCTAATCCTGAACTTGGTCCAGCTGACATGGAAAAGCTCTTTCGTG ATCATATAAAGATGCTTCAGGAACGCCGTGTGAACGAGTTTAGAGCACTCTTAGCTGAAGTCTTGACCATTGAAGCTGCATCCAGGGAGAGTGAGGATGG GAAAACAGTCCTTAATTCATGGTCTACTGCTAAACGCGTTTTAAAATCTGATCCAAGGTATAACAAGGTTCCCAGAGAAGAAAGGGAAACCTTGTGGCAC CGGTATGCAGAGGATCTGCTGCGGCGGCAAAAGTCATCTCATGATCCAAGGGAAGAGAAACATGCAGATTCTAAAGGTAGAGATGCTAAAGGTAGAAACC CTCATGAATCTGTATAACTTCCATTAGAAGGAATTGCCAGAGACTAAGATGATTAACTTTTTAGCCTGATATTAGAACAGAATTATATGACATTGAATGA AGGCAAAGGTATAAGTGCTATGTTTACTGTATCACTCCAATATACCTCAGATCATTCTGATCACATCATTTCACTTGTGTATCATTAATGTGAGAGTTTA GACAGTGCTCATCCTTTTCAATTTCCCCTTCCAACATGGTTTAGTAGATCATTTCATTCACAAACCTTAGTATTTGATTGTTCATAATACTTGTCTTTTG TGATTTTTAGATTCACAAACCATAGAAGCTTAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_40404; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_43273
| Blastp | Pre-mRNA-processing protein 40C from Arabidopsis with 52.83% of identity |
|---|---|
| Blastx | Pre-mRNA-processing protein 40C from Arabidopsis with 51.82% of identity |
| Eggnog | transcription elongation regulator(ENOG410XPZW) |
| Kegg | Link to kegg annotations (AT3G19840) |
| CantataDB | Link to cantataDB annotations (CNT0000254) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413264.1) |
| Pfam | WW domain (PF00397.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |