| Id Trinity | FTRINITY_DN54180_c3_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_43157 |
| Sequence | ATAAGTTTGGCAAGCTTATTGAGGCAAAGGTGGTTGTTGACAAACTCTCTGGGCGGTCTCGTGGTTTCGGATTTGTCACATTTGGTGAAAAGAAAGCAAT GGAAGATGCTATTGATGCCATGAATGGGATTGATTTAGATGGCCGAACTATAACTGTTGATAAAGCTCAACCTCAACAAGGATCAACTAGAGATGATGGT GATCGTTTCCGAGACCGCGACCGTGGTCGTGATCGTGGTCGTGATCGTGATTATGGAGGTGGTCGAGGATCCAATGGTGGTGAATGCTTTAAGTGCGGTA AACCTGGTCATTTTGCTAGAGAGTGCCCTAGTGAAGGGGAAAGAGGAGGAAGGTATGGTGGCAGGGATAGTAAATATGGTGGAAGCAGTGCTGGTGGTCG CTATGGTCCTGATAGAAATGGAGATCGTTCGTCTGGTGGGCGCAACAGGGATGCTGGTAGTCGTGGAGAGTCTGGAAATGATCGATATCATCGTGATCGT GATCGTGCTGGGCCATATGAACGACGCTGATCGGGAGGCTTTCTTCAATACAATCTAATCTTCTCATGAAGATTCGAAATTGGAGGGGTTGCTGTTACTG CTTCAACTTTCTCTTTTGTTCATGATGTTCCGGGATTGTTGTTTTGATGGATCGATGTTACCAGTGTTTTGATAAGCAATACTCGGCACATGTTTCAAAC TCTATTATGTTCCTAAATGCTGATCTTTTGGTCTGTAGAAATCTTATGCATTGGCCTATGGTCAAATTTGATGTTGTGCTCTATGCTATCATTTATTGCT GCCTGAGTATCTTGTTAATGGTGACTTTCATGCATGGGGAGTAACATATGACTTTTTTGCTGCTGGATTACATGTTTCAGTTTAAGAGGTTCTAGTAAGT TTCTGTGATGTTGGATTGGATGAATTTTGGAAGGACCAAGTAGAGTTTGTTCTTCTCATTTGGGGGAAAAGTTGTAAAAGTAGAATTCCCATTTGGCTAA CATGTTTCAAGAGAAAAAAGATTCTCCATATATCAGAAGATAAGTTATCTCCTCGAGCCACTAAAATCATGACATGTGTCCTATTTAACTATTTTCTGTA AAAATATCTCTAAAAACTAAAAAATAGGACATTGGTCATGATTTTAATTTGCTAGATTTCTGATTTGGCCTTGTGCTATATTAATGTTATTGAACTTTTG GCAGGATTCTTGGATGAATGTGATCTTTTTGGATACATCACTGGGTTCCTTTGTTGCTAATTGGACATTCATAGATTTTTAAACTTAAAAAAAGAAACTT TTCAGTTGCAAAATGCCATCTGTGGTTGCACCCAATGACAGAAAAGGGTTCCAATTTCTATATGATTGTGCAAATTGTTTGGAAGATGTTTGATTTGTTG AGCAAATTATTCATTATGGTGTCATTTGATTCATATAGTCAACTTATCGCATGAAAAAACTTGTTCGGTTAGATCCAATTTGTCTTTACTATAATGTGAT AGTCAAATCTGAGTTATAGTAGCAATTCCTTTCTCTTCCACCTCACTAGTATCAGATTTGAGATATCTGCATTACTTAACTACTACACTTTGATCATGAA CAAAAAATTGAGATTTTCTAGCATCAATGTGGAACTATTTAAGCGTAATAACAATATTATGAAGGCC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_40411; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_43157
| Blastp | Glycine-rich RNA-binding protein RZ1A from Arabidopsis with 51.35% of identity |
|---|---|
| Blastx | Glycine-rich RNA-binding protein RZ1A from Arabidopsis with 70.91% of identity |
| Eggnog | Zinc knuckle(ENOG411219Q) |
| Kegg | Link to kegg annotations (AT3G26420) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441025.1) |
| Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |