| Id Trinity | FTRINITY_DN54180_c5_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_43189 |
| Sequence | CAAGATTATGTGTAGAATAATAATAACATTTGTCCCATTAATGTCCTTAAGTTTCCCTTCATTCATATCCAGATCTTATCCAGTTCTATATATATAGCAT AGCACCAACCAAGCTCAAAGAGCATGGCTTCCAATATGATTCTAGTAGTCTCAAGTTTGGTTCTATCAGCTTTAGTTTCTCTCATACTTCAACTATTCTA CTTTTCACCCATTGACCCACTTCCACTTCACATACTACCTGCATCTTCATCCACAAACAACCATTTACAGAATGTGATAAAACTTGGAGAAGGGGATTTG AAGGATCCAGAAGATGTTTGTGTGGATAAAGAAGGCACTTTCTATACAGCAACAAGAGATGGTTGGATTAAGAGATTGCCCAGAAATGGAAATTGGGAGA ATTGGAAGCATATTCATAGTTCTACTTTGTTAGGAATCACAACAACAAAAGGAGGTATCATTGTATGTGATGCTATAAAGGGTTTGCTCAAGGTTACAGA AGATGGTGTCAGTATTCTTGTTTCACAAGTAAATGGTCTTCAGTTAAGTTTTGCAGATGATGTGATAGAAGCCTCTGATGGAAGTGTATATTTCAGTGTT GCTAGCACCAAATTTGATCTACACAATTGGCATCTGGATATGCTAGAAGCAAGACCTCATGGACAACTTCTTAAGTACAATCCAACATCAAATGAGATAG ATATTGTCTTAGATAATCTTGCCTTTGCCAATGGTGTTGCACTCTCCAAGGATGAAGATTATATTGTTATCTGTGAAACTTGGAAGTAAATAATTACATA GAATCTCCTATATGCTCGCTTAACCTCATTGATTTGTTTGTAACATGGCCCTAAGGTTTTAAACTGTGGTCGCAGTTACAGTTACATTGCTATTGTAAGA AAGTGGGACCATAATTACAGTTGTGGTGTAATTTGAAAGACGGCCTAAACCTTAATATTTCAGCTTCTTTTGTGATCGCTGACCCAAATTTAAAACCTTG TCGGCAAAATTCAAAATAATGCTTATTTATGTGCTAGTACATATTGTTCACACTGTATGTTTATCATCCTAACAATTGTTTTTCTTTTTGGTTAATCAGA TTTAGGTGTCTGAGGTATTGGCTAAAAGGAATAAACAAAGACAAAACAGACATTTTCATTGAAAATCTCCCTGGTGGACCTGATAATATTAATCTTGCTC CTGATGGGTCTTTCTGGATTGCTCTACTTCAGATTTCTACCAAAGGATTGGAGTTTGTGCACACTTCCAAGGTAGCCAAGCTCTTGCTAGCTTCATCACC AAGGCTATATAACTTAATCAATGGTGCAAAGCAGAAGGCAACAGTGGTGAAGGTGGCAACTGATGGTAAAATAATACAGAGGTTTGATGATGATAATGGA AAAGTGATTAGATTTGTCACTTCAGCTTTGGAGTTTGAGGACCATCTTTACCTTGGTAGTCTCAGTTCTAACTTTGTTGGAAAATTACCACTGCACAATA CTAGTAACTAGCAAGTTCAGCTTGCTGCCACTGAATAAGAGTGTATCATCAAACAATGTAAGCATCTTTTGATTTGTATGATTCAGACACAACATATATA ATCCAAGATTGTCCCTGTTATGCAAATTTGATGTTTTTTTTTTAATTTATGCAATTTTCTTGTTCTTCTTTTTAATTTATTGTGACATGTTAGTTGGATT AGTATTAGAGTGTAATATGTATGTACTGTCATTGTAAAAATTTACACACAGTAAGTACACCATCCACCATTCATTTGTATTATTTTTTCAAAGAGTCAAC GATAATAAAGCATGAATGGTGGATGATACAATGACAACGTATAAAACTCATACAGAATACAGAAAGTGCATTCATTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_40418; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_43189
| Blastp | Protein STRICTOSIDINE SYNTHASE-LIKE 5 from Arabidopsis with 33.33% of identity |
|---|---|
| Blastx | Protein STRICTOSIDINE SYNTHASE-LIKE 5 from Arabidopsis with 33.5% of identity |
| Eggnog | SMP-30 gluconolaconase LRE domain protein(COG3386) |
| Kegg | Link to kegg annotations (AT3G51430) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019414226.1) |
| Pfam | SMP-30/Gluconolaconase/LRE-like region (PF08450.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |