| Id Trinity | FTRINITY_DN54182_c1_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_45124 |
| Sequence | CAAACTCACAAAAACTACCCTCGCTTCTATTTTCCAATCGCAGATGAGTGCCGTCACGGTGTTCCTATCTAACTCCGCCGCCGCCATCATTTCATCTCCC TGAAACACCTTCCCTTCACTTTCAATATCACAAATAATATTCCTTCAACAAATCTGCGGTTGCATTTCTCTTCGTCACCACTTCTCAACGTCGCCTCTGA TTTACTCTTATTCGGTTCAGTGACAGAGGTCTTACACAACAAATCAGTTACCAATGCTGGGGTTTTCATATGGAGAAATACTTCTGTTGCTCGGAGCCAC TGCTGCTCTGATTGGTCCAAAAGATTTGCCAATAATAGCCAGAACGGCAGGGAGGCTAGCTGGTCGATCTATTGGATATGTACAATTGGCTCGTGGTCAG TTTGAATCTGTAGTGCAACAATCTCAAGCTCGCCAGGTTCACAAGGAACTGCAAGACACAATGGCACAGCTAGATGCTATTCGTCATGAAATTCGAAGTA TTTCAATTATAAGTCCTGGCCCTATGACCCGGAGGATTGTGGATAATCTTGACCACATATCTATGTCAGATGACAGTACAAAACTAGAAGATGTTGAAGA GAACAAGCCAATACCCACTGTTACGAAGGTTCATCGGCCACATCCACAACTTGAGATAAATATAATCATAAGCTGCCTTAGAAAATATGTGCTTACATGC CTATAATTATTTCCAGGATTCAACCTTATTAGCCTCAGATTCATGCAATATGCAAAGTCAAGCAACTACTTATGCTAGATTGGCGGAGTCCCCTGCAATA AAGAATGGTTTATCAGCAATTGGTGCTGAAGACAAGAAGATTGAAGATGAACTTCAACTTACTGTCATACCAGTTTCTGCTGAAAACACTGGACTCTTAC CAAAAAATCGTGGGGGTAATGCTACTTTTTGTTGTTTAGTGGGCTTTTGTTAGCATTATTGTCCAATATCTGTGATTCTTTGCTGCATACTTATCTAATG TAAAGCCTGTTACGCAGATTTTTTATGTGTGCATTTTGTGCATAATATGTGGCGTGCATGCTTCCTATCTACGTATATCACATAACCCATAAGTATGAGC GCTAAAATATGTATTTGTTAAGGTTTCATTTCAAAACTGATTGGAGATGAGAGTTTTAGGCCAATAGGTAAACCACACCGGAGAGAATGAGGTGGACAAT ATGAGACTTACTTCCTAACATGCTCCTTTCACACAAGCCTATTATTGTACCAAGCAGCGGAGTTACTTTTGATGCATGATGAAAGATTATCTTTTTGGCC AATAACAAGTGGAGAGGAGTTTGGCTTTGACTCTGATACCAACTTGAGGAGGATGAAAGATTTATCTTAATCGTTTGAGTGATTTGTGCACTCAACCTTT CTAATTGTAATACAAGGGTACATAAATCCTTTAACTTTAGGGATATAAAATCAGAGCATAGTAACAAGATATGATTTCATCATCATATATGTAAACTCAA TCAAATACAAAACCTTCTAATTATCTCAACAATCTTCACCTTAGTTTTTTTGTTATTTCCATTACATACAGACAGATGTTTTCGGATGTCATTTTTTGAT CTATTTTAGTTAGCTCATTTGGAATATACTATTATATGGTTAGCTGAAAAGGCTGGAATGAAAGAATGATTGTTGATCATTGATCTTCATTCATTGTTTA GACTGTGGCTCATTTGGTATGCACTAGGATATTATGAAAACTGTTATTTATTTCACTGTGATAAGATTGAATCCCTTATTTTCTTTTTATATTTAGGAAT CTGTGGTAGCCTTGTGAATCATTCCTGTCTATGATTGAGTGACATGCCTGGACTATTTAATGCATTATTGATCAGCTTATGTTTGTTCTAGAATGATATT TGATTTGAAACAAGCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_40433; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_45124
| Blastp | Sec-independent protein translocase protein TatB from Nitrosomonas with 24.03% of identity |
|---|---|
| Blastx | - |
| Eggnog | Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation (By similarity)(COG1826) |
| Kegg | Link to kegg annotations (NE0638) |
| CantataDB | Link to cantataDB annotations (CNT0002602) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019428063.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |