Id Trinity | FTRINITY_DN54188_c1_g2_i1 |
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Name Transcript | Ll_transcript_44584 |
Sequence | TTAACATTTACTATTCTGAAACTAAATCAAATTAGTACTTATAGTTATATTGAATAATTTGACCAAAGTTTGAATCTTTTAAACTAAATAGTAGATATTA TTGTTTTATTTTTTATCAGCTATAGAGTGCAGTTCAAGTTGCATGCTGGTTTTGTGCGGAAAATCCAACACAGAAAATGAAGCTGCTAAAGCTATTAAGA TCAATAACACTATCAAGCTTTCTCAAAGTGGAGATTTTTCTGTTGTTTTGCATTCTGAATTGGATAAAACAGATATGAAACACTCTTTTCAAGTGGATTC CTTCATGAATTCTCTTTCCACAAACACATTTGGAAGGTTTCTTATCTGGTCTCCACAGTTAGACACAACCCATGATGTTGTTTCAAACAACTTTTCTGAG CTTCCCGTTGGTACAGTTTGTGTTGCTGATGTTCAGACCAAGGGACGAGGCCGGTCAAAGAACGTCTGGGAGTCTCCTTTAGGCTGCCTCATGTTTTCTT TTACCCTGCAAATGGAGGATGGGCGGGTTGTTCCTTTAGTCCAGTATGTGGTTTCTCTGGCTATCACAGAGGCAGTGAAGGATATCTGTGACAAAAATGG ATTACCCTTCCTTGATGTTAAAATCAAGTGGCCAAATGATATTTACTTGAATGGCTTTAAAGTTGGAGGCATTCTATGCACCTCAAAATATTCATCAAAG AAGTTCAATGTCAGTGCAGGTATAGGCTTGAATGTCAATAATGAGAAGCCGACAACATCTTTAAATTCAGTTCTAAGAGAATTGTCAGTTGAAGGTTACC AATTTCGAAGAGAAGATGTTCTGGCAGCCTTTTTCAACAAATTTGAGAAATTTTATGAGCTATTTATCAACCAAGGTACTCTGATAATTGTCCCGTTAAA TTGTTTTTGTTATCATCTCCAACATCAGGTTCCAATTCTGATTATCATCATCTTACTGCGCCTATGTTTATCTCTCTCACTGTAAACCCAGATAGATAAA ATCTTCTAATAATCTGAAATCAGCATGTGGAGTTATCCTTCTCATACTTGTGTATTAATCACATTTGAAGATTACAATGGCCTTGGTAGGAAACTGTCGT TTGGGTATGGACCGTTAGTGTAAAGCCAACTTTTTTTTATATTTGAAACGGTCTAAACCCATTGAAATATATAGAGATGGTAATTTGGGAATTTATGTTT GCTAACACATTTTGCATAGCATTTGTCTATCAACAAATCCTTGGGAGGGAAAAAGGGGTGTAAAGTATAGGACAAAGGATGCACCTTTGCCGTATATAAT GACTGTTTCTTGTTTGTTACCCTTACAGGTAGAAAATTAGCCCCAATTTTCCCTCAGTTTGGATAATTATTTTCCTATTTTAAATGCTTTAGGATTTTCT TTTAAAACCCTGTACTCTTGGCACAATGGTAATGGTGCTGTGTTGAGGTCTTATGGTCACATACTCACATTCTTAGTCATGGAAATATCCTCTCCACTTA CAGGTAAGGTTGTATACATTGGACCCTCCCCAAAGGCCCAAACACTCGAAGTGTAGGAGCCTCTTACAATAGGTCACTTGTACCTTAGTTTCTGTCCAAA ATGAAGAAGGAAAAAAGAATCATACTCTTAGCTTGTGAGACCTGGATCACATGATGTTTTCATGTTGTCTCCTATTCTTTTCTCGGTCTCTTTTTTCAAT CCATAGTCTATGCTTTGTCAGAGGAACTGAAAAGAGCAAGTGTAGATGTCTATTTTGGTCCTCCAAAGATGGACATGCCACTAGGTTTCTACTCCATTTA TAAAAACATCAAATTTGTCTTTCAATATCAATTTATGCTATCAAGTCGGTCTTTGAAGTGACATCAACTTGTCCCCTAAAGAACAAGACTCTTAACTATC ATTGGAGAACATGGAAGTCCATTGTGATGTCACAGGCATCTTTAGTGGTCTAAAATAGACACTCCAAAATAAATAATAAATAAATATACAACCAAAATGG TATTTTTCCGGTTAATGTGTTACAATTATGTTGTTTCCAGACTTCAGCAGAGTTTTCTAAAACTTACTGTATTTTGTGTTGATTACTAACCGATGGGCAT GTCTCCCGACACTTTTACATAATGAAGGTAATTTTGAACTTTGCTTGTTCTGTTGAATGCAGGGTTTCAAACCTTGGAGGAACTATATTACAAGACATGG TTGCACAGGTATATTGAATCCTAAGTACTCTTGTTTGTTGTTTATGCTGGAAATATTTTTCCCTTCTGTGGCAATTGTCTTATAACTGCTACAGCTCCAA GTAACTAACACCAACTTTTTTGTTATTAACAGATTAGGGCTAATCCTCCACTCTCATATCTATACTATTTGTATAATTTAGTGGCGTAAATTAGCTTATT ACTAATAACTTATATTTCCAACTTACATCTTATTCCTATTTTGTATCAAAAATTAAATCTATGATTACCCGTAATAATAAATTTTATACAATTTAGTCTA TATCTATATAAATATTATTTATAGTAGTATTAATTTATTGAATAAAAAAATACTAGTTGACAGTCATGGTAGTGCCACCCTTTCAGCTTAAATACCCCAC ACTATTTTATTCTCCCTAGAGGGAGCCTCTCATGAACGAAACACATGATTTCAGAGACTTTAGTAGCTTAGTGGTAGCTACTCAATGGAATCAATGACTA TAAGTCGGTGAGACCATGGGTTCAAATCACGGGAGGCTCATTCTTGATACAATAAAATATTACATGGTTTATTTAAGCTTGAAAGGTTACACACTCAATA ACTTTAGGAGCTCATTGGGGTTGAATGTCAAAGGCTGTATGGACATTAAATATGGTTATCCTCTCTACAATCATTTTAAAATTACTAAAACCAGCATATA ATCACTATTTTAAGTTCTAAACTTTACTCCGTTTTACTCTTCGCATATGGCAATTTTAATCTTGAAGGAGTCGGAATGAAAATTTCCTAATATATTATCA TTATACTGATACCTGAACTTGTTTGGTAAGTTTTAGTTAGCAGTTGAACCATAAACTTAAACAATATGTTGTATTCATTGTCCTGTTTATACTTCTATGT CTACCAAACAAACCTGTTTATGCATATATGTGGAATGGCTAAATTTTACATTCATCTATATATGAAAAATGTATTGCAGTGGTCAGAGAGTTATCGTACA GGAAAAAAACGAGGATACAGTATCCGAGCATGTCGTAACTATACAGGGTTTGACATCCTCAGGATATCTGTTGGCAATTGATGATGACAATCAAATGTGT GAGCTCCACCCTGATGGCAATAGCTTTGACTTTCTCAAAGGACTGGTCAGAAGTAAACTCAACTGAAGAAGATTCCTTGTCACATTTCATTCAAGGCAAC AACCCTTACACCCACTTTGTATATATTGCCAAGGTCTTGGCTTTATTGCTAAAATTTTCCAATAAATTAAATTTTTAGTGCTTTTGTATTCCATTTGTGA AACTTGTTGTTTGGTCAAACAAGTTCTTCTACCCAATGGCATGTAATAAAACATAAAAACATCATGGTTGCAACCAAAAGAATGAATTTTTCTTCTTCTC TTAGTAGGACTTAGTGCATGATTACTTTATTCAATTATTGGTTAAGTAATGTGGTGGTGATTGCTTTATTCAATCATTGGTTAAGTATTGTGGTCGTCCT TCTTGGCCAGCTATAATAAATTAATTGAAAAAAGTGCG BLAST |
Tissue | flowers |
Gene name | LI_gene_40491; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_44584
Blastp | Biotin--protein ligase 1, chloroplastic from Arabidopsis with 65.85% of identity |
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Blastx | Biotin--protein ligase 1, chloroplastic from Arabidopsis with 65.23% of identity |
Eggnog | Biotin- acetyl-CoA-carboxylase ligase(COG0340) |
Kegg | Link to kegg annotations (AT2G25710) |
CantataDB | Link to cantataDB annotations (CNT0002087) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019433158.1) |
Pfam | Biotin/lipoate A/B protein ligase family (PF03099.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |