| Id Trinity | FTRINITY_DN54188_c1_g2_i10 |
|---|---|
| Name Transcript | Ll_transcript_44601 |
| Sequence | GATGTTCAGACCAAGGGACGAGGTTTGATTTTGATATTTACTAATATAACAGTCTACTACTTTTAACTTATGTTTTAGTTTATGTCGAAGTTGCTCTGAG CCTGTAAACTCTCAGGCCGGTCAAAGAACGTCTGGGAGTCTCCTTTAGGCTGCCTCATGTTTTCTTTTACCCTGCAAATGGAGGATGGGCGGGTTGTTCC TTTAGTCCAGTATGTGGTTTCTCTGGCTATCACAGAGGCAGTGAAGGATATCTGTGACAAAAATGGATTACCCTTCCTTGATGTTAAAATCAAGTGGCCA AATGATATTTACTTGAATGGCTTTAAAGTTGGAGGCATTCTATGCACCTCAAAATATTCATCAAAGAAGTTCAATGTCAGTGCAGGTATAGGCTTGAATG TCAATAATGAGAAGCCGACAACATCTTTAAATTCAGTTCTAAGAGAATTGTCAGTTGAAGGTTACCAATTTCGAAGAGAAGATGTTCTGGCAGCCTTTTT CAACAAATTTGAGAAATTTTATGAGCTATTTATCAACCAAGGTACTCTGATAATTGTCCCGTTAAATTGTTTTTGTTATCATCTCCAACATCAGGTTCCA ATTCTGATTATCATCATCTTACTGCGCCTATGTTTATCTCTCTCACTGTAAACCCAGATAGATAAAATCTTCTAATAATCTGAAATCAGCATGTGGAGTT ATCCTTCTCATACTTGTGTATTAATCACATTTGAAGATTACAATGGCCTTGGTAGGAAACTGTCGTTTGGGTATGGACCGTTAGTGTAAAGCCAACTTTT TTTTATATTTGAAACGGTCTAAACCCATTGAAATATATAGAGATGGTAATTTGGGAATTTATGTTTGCTAACACATTTTGCATAGCATTTGTCTATCAAC AAATCCTTGGGAGGGAAAAAGGGGTGTAAAGTATAGGACAAAGGATGCACCTTTGCCGTATATAATGACTGTTTCTTGTTTGTTACCCTTACAGGTAGAA AATTAGCCCCAATTTTCCCTCAGTTTGGATAATTATTTTCCTATTTTAAATGCTTTAGGATTTTCTTTTAAAACCCTGTACTCTTGGCACAATGGTAATG GTGCTGTGTTGAGGTCTTATGGTCACATACTCACATTCTTAGTCATGGAAATATCCTCTCCACTTACAGGTAAGGTTGTATACATTGGACCCTCCCCAAA GGCCCAAACACTCGAAGTGTAGGAGCCTCTTACAATAGGTCACTTGTACCTTAGTTTCTGTCCAAAATGAAGAAGGAAAAAAGAATCATACTCTTAGCTT GTGAGACCTGGATCACATGATGTTTTCATGTTGTCTCCTATTCTTTTCTCGGTCTCTTTTTTCAATCCATAGTCTATGCTTTGTCAGAGGAACTGAAAAG AGCAAGTGTAGATGTCTATTTTGGTCCTCCAAAGATGGACATGCCACTAGGTTTCTACTCCATTTATAAAAACATCAAATTTGTCTTTCAATATCAATTT ATGCTATCAAGTCGGTCTTTGAAGTGACATCAACTTGTCCCCTAAAGAACAAGACTCTTAACTATCATTGGAGAACATGGAAGTCCATTGTGATGTCACA GGCATCTTTAGTGGTCTAAAATAGACACTCCAAAATAAATAATAAATAAATATACAACCAAAATGGTATTTTTCCGGTTAATGTGTTACAATTATGTTGT TTCCAGACTTCAGCAGAGTTTTCTAAAACTTACTGTATTTTGTGTTGATTACTAACCGATGGGCATGTCTCCCGACACTTTTACATAATGAAGGTAATTT TGAACTTTGCTTGTTCTGTTGAATGCAGGGTTTCAAACCTTGGAGGAACTATATTACAAGACATGGTTGCACAGGTATATTGAATCCTAAGTACTCTTGT TTGTTGTTTATGCTGGAAATATTTTTCCCTTCTGTGGCAATTGTCTTATAACTGCTACAGCTCCAAGTAACTAACACCAACTTTTTTGTTATTAACAGAT TAGGGCTAATCCTCCACTCTCATATCTATACTATTTGTATAATTTAGTGGCGTAAATTAGCTTATTACTAATAACTTATATTTCCAACTTACATCTTATT CCTATTTTGTATCAAAAATTAAATCTATGATTACCCGTAATAATAAATTTTATACAATTTAGTCTATATCTATATAAATATTATTTATAGTAGTATTAAT TTATTGAATAAAAAAATACTAGTTGACAGTCATGGTAGTGCCACCCTTTCAGCTTAAATACCCCACACTATTTTATTCTCCCTAGAGGGAGCCTCTCATG AACGAAACACATGATTTCAGAGACTTTAGTAGCTTAGTGGTAGCTACTCAATGGAATCAATGACTATAAGTCGGTGAGACCATGGGTTCAAATCACGGGA GGCTCATTCTTGATACAATAAAATATTACATGGTTTATTTAAGCTTGAAAGGTTACACACTCAATAACTTTAGGAGCTCATTGGGGTTGAATGTCAAAGG CTGTATGGACATTAAATATGGTTATCCTCTCTACAATCATTTTAAAATTACTAAAACCAGCATATAATCACTATTTTAAGTTCTAAACTTTACTCCGTTT TACTCTTCGCATATGGCAATTTTAATCTTGAAGGAGTCGGAATGAAAATTTCCTAATATATTATCATTATACTGATACCTGAACTTGTTTGGTAAGTTTT AGTTAGCAGTTGAACCATAAACTTAAACAATATGTTGTATTCATTGTCCTGTTTATACTTCTATGTCTACCAAACAAACCTGTTTATGCATATATGTGGA ATGGCTAAATTTTACATTCATCTATATATGAAAAATGTATTGCAGTGGTCAGAGAGTTATCGTACAGGAAAAAAACGAGGATACAGTATCCGAGCATGTC GTAACTATACAGGGTTTGACATCCTCAGGATATCTGTTGGCAATTGATGATGACAATCAAATGTGTGAGCTCCACCCTGATGGCAATAGCTTTGACTTTC TCAAAGGACTGGTCAGAAGTAAACTCAACTGAAGAAGATTCCTTGTCACATTTCATTCAAGGCAACAACCCTTACACCCACTTTGTATATATTGCCAAGG TCTTGGCTTTATTGCTAAAATTTTCCAATAAATTAAATTTTTAGTGCTTTTGTATTCCATTTGTGAAACTTGTTGTTTGGTCAAACAAGTTCTTCTACCC AATGGCATGTAATAAAACATAAAAACATCATGGTTGCAACCAAAAGAATGAATTTTTCTTCTTCTCTTAGTAGGACTTAGTGCATGATTACTTTATTCAA TTATTGGTTAAGTAATGTGGTGGTGATTGCTTTATTCAATCATTGGTTAAGTATTGTGGTCGTCCTTCTTGGCCAGCTATAATAAATTAATTGAAAAAAG TGCG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_40491; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_44601
| Blastp | Biotin--protein ligase 1, chloroplastic from Arabidopsis with 70.54% of identity |
|---|---|
| Blastx | Biotin--protein ligase 1, chloroplastic from Arabidopsis with 71.23% of identity |
| Eggnog | Biotin- acetyl-CoA-carboxylase ligase(COG0340) |
| Kegg | Link to kegg annotations (AT2G25710) |
| CantataDB | Link to cantataDB annotations (CNT0002087) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019433158.1) |
| Pfam | Biotin/lipoate A/B protein ligase family (PF03099.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |