| Id Trinity | FTRINITY_DN54189_c1_g2_i13 |
|---|---|
| Name Transcript | Ll_transcript_44241 |
| Sequence | CGGCGATATTAAAACCCTAATTTGCGATCTCTGCATTTCTCTCTTCTCTTCCCTTCTCTTTTCCTCGCAGCAATGGCACCCGAAGAGAGAGAGAACCCAT ACGAAGGTTTAGGAACCGGTGGCAAATTCCGAAAACGCCCTTTCCGAAGAACCCAAACAACACCCTATGATCGTCCTTCAACATCACTCACAAACCCTAA CAGAAACAACAACAACAATAACAACAATGGTTGGTTTTCAAAGGTTGTCAAACCCGCTCGTAAGTTAATCACTTATAGCGCTCATTCAATTTTCTCCTCC CTTTTCCGTAAGCGCCTCCCTCAATCTCAATTTTCAGGCACAGAAACAGAACAAGAAGTGAGAAACAATCATCTGGAAGAATCTGCATTTAAACAGGTTT CAATCAATTCCTCAGGCAAGAAACAAGTAACTGTTGGTAATGGTGAAAGTGATGCTCAAATTAATTGCCCTGATGGAGGTGGATTAACTGAACTTGAGAA GTTACTAAGACAGAAGACTTTCACCAGATCCGAGATTGATCATTTGACAGCACTTATGCGCTCAAGAACTGTGGATACACCTATTAGGGAAGAAGAGAAG CGCACAGAAGTGGTTCCTTCCGAACCAATGTTGTTTTCCGAACTAAAGGATGAAGATCCCAAAACACCCATAGTTGAAAATAGGATTGAAAACCATCTTC CTCTAACCCCATATGTTACTTCCAGTGTTCCTATTGAGGATGTTGCTTCACCTGCAGAGCTTGCAAAAGCTTACATGGGAAGCAGGCCTTCCAAGGTATC CTCATCAATATTTGGTATGCGAAGTCCTGCAGCAAGGGAGGATCCAGCTTTTTTAAAAAGTAATGATAACCTTCCTCTTAGCTCCCCTGTTATGTCAATT GTGCCAAGGACTGTTAAACATGTTGGGGTTCATGAAAATGGTTATCCAACCGCAAGAACTCGTGGAAGATCTGCAATATATAGTATGGCTCGAACACCTT ATGCCAGAATTTATCCAACCTCTAAGGGGATTGGGCGTGCTGTTGAAGGTGAGCCGTCATCTTCAACTCACTCTACGATGGATCAGGACATGCTTTATGG ATCTAAACAAGGGTCAGTAAAGCGTAGAAGTTCAGCATTGGATAATGATGTAGGATCTGTTGGTCCTATACGTCGAATCCGTCACAAGGCTAATCTATAT TCCATAGGCTCAAACTTACCTCTCTCTCGCAGTTCTCTATCAATTGCTAGGAGCGGACTCGGTGTTGATGCTGCCCAGCAACCCTCATCTTCCATGCAGA ATCCTATTGTGCTGGATGAAGATAAGCATAGCCATATGAAATTGTCAGAAGAAAATGTGGGCAACACTAGGCCTAATATGAGTGGCCCTTTACCCTCGAA ATCTAGTGAGATGGCTTCAAAGATACTGCAGCAACTTGATAAGTTGGTTTCCCCTAAAGAAAAGTCATCTGAATCAAGGCTGCCAACTGTGAATGATAAT TCATCAATGAAGTTGGCACCTTCCATGTTACATGGACAGGCTCTTCAAAGCATGGAAATAGTAGACTCATCAAAATTGCTGGATACTGTAAAAGATGATA GATTCAATGTTTCACCTGGAAATTTGTCTGATAGTTCTCAAAAGTTAACTTCACAGATAAACAAGGTTGAAAATGGTTCATTGAAGCTTCTTGCTCCTTC TGGTGAATTATTTCCAGTTCTAACTGATGCAGATTCTACAATACCAAGGAATCAAATCATCTCTAGTGTGAAGTCTGTGGATTCTTTTGTGATAAAACCT GTTTCATACCCTCCACAAAAGAAGAGAGCATTTCATATGAGTGCACATGAGGATTGCTTGGACGTGGATGATGATGCTTATCCTAATGGGGCTGTGTCCT ATGTTTTTCCTGTTGAGAATAAAATGACAAGGCCCGCTGCAATGACAGTGAAGGATACCTCTGGCACTGAAGCCGTTGTGCAGGAGAATACCCAATCATT ATCTGTAGTAAGGCCATCCAAAAGTTCTACAATTGGCCGGGAGGCTCATGTTGGGGCTGATGATATAACTGATGGGTGTAGGGTAGGTGCAAAAGTTGAT GTATCAACCTCTACGACATCATCTACTCCTGATCAAACCTCCAAGCCTGCTACAGCAGATACACAAACAAGTTTTGGCTCGCGCAATCCTGCTCCACCGA ATGGGTTAATTGCCATTCCTCCAGTCTTTGGCTTTGTGAATAAAGTGGCTCCACGAAAGGAGTTAACTAATTCTGGTTCAATATTTGGTTTGGAAAAGGT TGTTTCATCAAAGGAGTTTGGTGCTGATGTCCCGTTAGTGAACTTTGGTAGCAACGGAAATGCTGACAAGGTTCCACAAATGCCATCTACTTCATCATCA GTTGGTGGTGAATCTACTTTTCCGAATTTCAGTGTTTCTTCCAACTCTAAGCTGGGAACCTCAATCAGTTCTGCCGCTGTTGCTGCTGCAACGGATTCTA TGCCAAAAGTTCTTGAGTCTAGTAATGATGATACTAAGACTAATACAGGTTCTGTTAGGTCTCCAGAACTTCCTGTTTCATCGGCAGCAACGACACCATT GTTCACATCAACAGGTGCATTTACTTTTGGTCAGAGTAATGGATCTCTTGCTACAAGCACTTCACTTTCCTCTCCCTTTACCAGTCAGAATGTATTCAGT AGCTCATCCCTTGCAGCAAGTAGCAGCAGCATTAGTGCCACTAGTACTACTGCCATAATTCCATCAAGTAATAGCAGTTCCTCCAATCCGTTGGTGGCAT CTTCATCTTCGCCAACTCCCTCTTTCAAATTTGGATCTTCTTCTTTCCCATCAACAGATTTACCTGTATCATCTTCTGGCTCAGAACCACTGGAAACCAA GAACATAAACAGTAATCTAAGCAGCACTGCTTTTGGTAGCTCATCTGCTGCTGTTGGAAGCACAGGGAGTGGCCTTTTTGGTTTCAGCTCCTCGGCAATG ACAACTATAACTAGCCAAGCTCAGGGTTCTGTTATTGGTTCTAGCAATGGATCTTTGCTTAATGCCCAGGCATCTTCTGCCAGCAGTGGGTTTGCAACTT CTACCCAAACCCAGTCAGTTCCATTTGGTTCATCTGCACCATCTCCATCATTTGGGTTGACTGGGAATACAGCCCTTTCTTCAGGCAACTCCTTGTTTCC TTCTGCAACTCCCGCCACTAATGCAGCTTTTTCTTTTGGGAGTTCATCATTTCCTTCTTCAAGTTCTGCCGTAAACATTTTCAATTCTGGTACAACTTCT GGGCTAGCTACCTCTGCTCCCTCTTCAGCGGCCAACTCTGTAAGCTCCAACAGTGGTACGAGTTCTGCTTTGTTTGGGTCTTCAAGTTGGCAGCCCAGCA AATCGTCTCCATTCGGGTCCACATTTAATTCTTCATCGTCTCCATCTGCTTTTGGACTTGGTACCTCTGCTTCCTCTTCAGCAGCGGCCAACTCTGTAAG CTCTAGCAGTGGTACAAGTTCTGCTTTGTTTGGGTCTGCTAGTTGGCAGCCCAACCAATCTTCTCCATTCGGGTCCGCATTTAATTCTTCACCTTCTCCA TCTGGCTTTTCATTTGGAACATCTGCTTCTGTTCCTTCTAGTTCACCCACTATGTTTTCGTCAACTCCTCAATTCTCATTCACTTCAGCAGCAGCCACTA CCTCCACACAGCCTGCTTTTGGAAATCCTAATTCTGTCTTCACATTTGGTTCAGCTCCTGTTAATAATGATCAGATGACTATGGAGGATAGTATGGCTGA AGACACAGTTCAAGCAACTCCACCAGCGATTCCGGCATTTGGTCAGCAACCCAACCCGTTCGGAGCATCAACTCCATCAGGAGCCAATCCTTTCCAGTTT GGTAGTCAACAGAATGCTACTCCGCCAAACCCTTCTCCGTTTCAGGCTTCTGGCAGCGTAGACTTTAGTGGCGGAGGAGGTAGTTTCTCATTAGGCACAG GTGGTGGTGACAAATCTGGTCGAAGAATTGTGAAAGTTAAAAACAGGCAGCGTAAGAGGTAGGACTATTGTTTATGGAAATGATTACTTTCTACGACCAT TGCAGGCTGCACTTAGCGTGACAAAAAAGTAATCTCCATAGAGTGATTGCTGGATATTGCTTTTTTACTTGGCAATCTGGACAAGCGGTGCTATTGAAAG CTAATCAAAACATGCAAGCTTGTGAGTTTCTTTCTTCCTCCATATATTACAGAATGCAATGCTGAAGTGTTCCAAATTTTGTAGTTGCATGGTATGAGGG AACATAATGTACTGTACTTGTAATGGTTTCAGGTCACAGTATTCATGATTTGGTTAGTTAAAATTGCTAAAATCTCTGTATTCTTGTTACTTGTATCATA CCAAAATTATGAATTTATGGTGTAGCTGGTTGTAACTTGAAGTTCCAGTGAGCAATCTGTGAGCTATTATTAGCTGCTTCTGGTTAGTCATAATTGATTT TTACTTTGCTAAGTAACCACAGCATGAAGAATATTTTGCTGAGTTTAGTAAAGATAAAATAATAGGAACGAAATTATTAGACTGATAATTACTAGAAATC AAAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_40494; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_44241
| Blastp | Nuclear pore complex protein NUP1 from Arabidopsis with 39.48% of identity |
|---|---|
| Blastx | Nuclear pore complex protein NUP1 from Arabidopsis with 39.42% of identity |
| Eggnog | nuclear pore complex protein(ENOG410XPV4) |
| Kegg | Link to kegg annotations (AT3G10650) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019427905.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |