Ll_transcript_44224

• Id Trinity: FTRINITY_DN54189_c1_g2_i4
• Name Transcript: Ll_transcript_44224
• Sequence: CGGCGATATTAAAACCCTAATTTGCGATCTCTGCATTTCTCTCTTCTCTTCCCTTCTCTTTTCCTCGCAGCAATGGCACCCGAAGAGAGAGAGAACCCAT ACGAAGGTTTAGGAACCGGTGGCAAATTCCGAAAACGCCCTTTCCGAAGAACCCAAACAACACCCTATGATCGTCCTTCAACATCACTCACAAACCCTAA CAGAAACAACAACAACAATAACAACAATGGTTGGTTTTCAAAGGTTGTCAAACCCGCTCGTAAGTTAATCACTTATAGCGCTCATTCAATTTTCTCCTCC CTTTTCCGTAAGCGCCTCCCTCAATCTCAATTTTCAGGCACAGAAACAGAACAAGAAGTGAGAAACAATCATCTGGAAGAATCTGCATTTAAACAGGTTT CAATCAATTCCTCAGGCAAGAAACAAGTAACTGTTGGTAATGGTGAAAGTGATGCTCAAATTAATTGCCCTGATGGAGGTGGATTAACTGAACTTGAGAA GTTACTAAGACAGAAGACTTTCACCAGATCCGAGATTGATCATTTGACAGCACTTATGCGCTCAAGAACTGTGGATACACCTATTAGGGAAGAAGAGAAG CGCACAGAAGTGGTTCCTTCCGAACCAATGTTGTTTTCCGAACTAAAGGATGAAGATCCCAAAACACCCATAGTTGAAAATAGGATTGAAAACCATCTTC CTCTAACCCCATATGTTACTTCCAGTGTTCCTATTGAGGATGTTGCTTCACCTGCAGAGCTTGCAAAAGCTTACATGGGAAGCAGGCCTTCCAAGGTATC CTCATCAATATTTGGTATGCGAAGTCCTGCAGCAAGGGAGGATCCAGCTTTTTTAAAAAGTAATGATAACCTTCCTCTTAGCTCCCCTGTTATGTCAATT GTGCCAAGGACTGTTAAACATGTTGGGGTTCATGAAAATGGTTATCCAACCGCAAGAACTCGTGGAAGATCTGCAATATATAGTATGGCTCGAACACCTT ATGCCAGAATTTATCCAACCTCTAAGGGGATTGGGCGTGCTGTTGAAGGTGAGCCGTCATCTTCAACTCACTCTACGATGGATCAGGACATGCTTTATGG ATCTAAACAAGGGTCAGTAAAGCGTAGAAGTTCAGCATTGGATAATGATGTAGGATCTGTTGGTCCTATACGTCGAATCCGTCACAAGGCTAATCTATAT TCTAAAGGCTCGGGCTTACCTCCTTCTGGTAGTTCTCTATCTATTGCTAGGAGTGGACTCGGTGTTGGTGCTCCTCAACAACCCTCATCTTCCATGCGGA AGCCTATCATGTGGGATGAAGTTAAGCATAGCCATATGGATTTACCAGAAGAAAATGTGCAAGACACTAGACCTAGTAAGAGTGGCCCTTTACCCTCAAA ATCCAGCGAGATGGCTTCGAAGATATTGCAGCAACTTGATAAGATGGTTTCCCCTAAAGAGAAGTCATCTGAATCAAGGCTACCAAATGTGAATGATAAA TCATCAACGAAGTTGTCCCCTTCCATGTTACATGGACAGACTCTTCGAAGCATGGAAGCAGTAGATTCATCAAAATCGCTGGATACTGTAAAAGATAATA GATTCAATATTGCACCTGGAAAGTTGTCTGATAGTGCTCAAAAGTTAGCTTCACAGATAGACAAGGTTGAAAATGGTCATTTGAAGCTTCTTGCTCCTTC TGATGGACTTGTTCCATCTGTAACTAATGCAGATTCCAGAAATCCAAGGAATCAAACCAATTCTGCTGCGAAGTCCGTGGATTCTTTTGTGGTAAAATCT GCTTCATATCCTCCACAAAAGAAGAGAGCATTTCATATGAGTGCACAGGAGGATTGTCTGGACATGGATGATGATGCTTATTCTAATGGGGATATGTCCT CTGTTCTTCCCGTTGATAACAAGATGACAAGTCCCAATGCAATGACAGTGAAGGATACCTTTGGTACTGAATCCGTTGCACAGGAGAATACCCGATCATT ATCTGCAGTAATGGCATCCAAAAGTTCTACAATAAGTGAGGAAGCTCATGATAGGACTGATGATAATGCTGATGGGTCTAGGGTCGGTGCGAAAGTTGAT GTATCAACCTCTTTGACATCATCTATCTCCGATCCAACTTTTAAGCCAGCTACAGCAACTACAAGAACAAGTTTTGGTTCCCACAAATCTGCTTCACCAA ATGGATCAAGTGCTATTCCTCCAGTCTTTAATTTTGAGCCATCAAAAGACATAACCAACTCTGGTACAATATTTGGTTTGGAAAAGGTTGTTTCATCAAA GGGGCTTGATGCTGATGTTCCATTAGTGAACTTTGGCAGCATTGGAAATGCTGGCAAGGTCCCCCAAATGCTATTTACTTCATCACCAGTTGTTGGTGAA TCTACTTTGCCGAATTCAGGTGCTTCTTCTGACTCAAAGCTGGGGAGCTCGATCAGTTCTGCCACTGTTTCTGCTGCAACTGATTCTATGCCAAAAGTTC GTGAATCTGGTAATGTTGATGCTAAGACGAATATAGATTCTGTTAAGCCATCAGAAATTCCTGTTTCATCTGCAGTAACAACATCATTGTTCACACCACC AACAAGTGCATTTACTTTTGGCCAAAGTAATGGATCTCTTGCTGCAAGCTCTTCACTTTCCTCACCCTTTACCAGTCAGAATGTATTCAGCAGCTCACCT CTTGCAGCAAGCAGCAGCAGCATTAGTGCCAATAGCACTTCTTCCATAATTTCATCGAGCAGTAGCAGTTTCTCCAATCCGTTGGTGGCATCTTCATCTT CAATGACTTCCTCTTTCAAATTTGGTTCCTCTATTGTCCCATCAACAGGTTTACCTGTATCATCTTCTGTCTCAGAACCAGTGGAAACTAAGAATAGGGA AGTTGTAGGAAATGGTAATCTAAGCAGCACTGTTTTTGGTAGCTCATCTTCTGCTGTTGGAAACACAGGGAGTGGCCTTTTTGGTTTCAGTTCCTCAGCG ACGACTAGCCAGTCCCAGGGTTCTGTCATTGGTTCTAGCAGCGGATCAATGTTTACTGCTCAGGCATCTCCTGCTACCAGTGGGTTTGCAACTTCTACCC AGACCCAGTCGGTTCCACTTGGCTCATCGTCATCATCTTCATTTTTTGGGTTGACTGGGAATACATCCTTTTCATCTGGTAATTCATTGTTTCCTTCAAC TCCTGCCACAAATGCAGGTTTTTCTTTTGGGAGTTCATCATTTCCTTCTTCAAGTTCTGCTACAAACATTTTCAACTCTGGTACAACTTTTGGATTTGGT ACCCCTGCTTCTTCTTCGGCAGTCAACTCTGTAAGCTCCAACAATGTTTCAAGTTCTTCTTTGTTTGGGTCTTCTAGTTGGCAGCCCAGAGAATCGTCTC CTTTTGGGTCCGCATTTAATCAAACATCTACTGCTTCTGTTGCTTCTACTAGCTCCCCCACAATGTTTTCGTCAACTCCTCAATTTTCATTCACTTCAGC AGCAACCACTACCTCCACACAGCCTACTTTTGGAAATCCTAATTCTCCCTTCACATTTGGTTCAGCTCCTGTTAATAATGATCAGATGACTACAGAGGAT AGTATGGCTGAAGACACTGTTCAAGCAACTCCACCAGCGACTCCTGTATTTGGTCAGCAAGCAACTCCACCAGCGACTCCTATATTTGGTCAGCAAGCAA CTCCACCAGCAACTGCTGTATTTGGTCAGCAAGCAACTCCATCGGCAACTCCTGTATTTGGTCAGCAATCTACCCCAGTTCAATCAAATTTTGTATTTGG AGCATCAACTACATCAGGAGCCAATCCTTTCCAGTTTGCCAGTCAACAGAATACTACTCCACCAAACGCTTCTCCGTTCCAGGCTTCTGGCAGCGTAGAA TTTAGTGCTGGAGGAGGGAGTTTCTCATTAGGCACAGGTGGCGGTGACAAGTCTGGTAGAAGAATTGTGAAAGTTAAAGGTAGACAGCGCAAGAGGTAGG ACTATTGTTTATGGAAATGGTTACTTTCTATCATTGCGGCGACAAAGAAATAAGCTCTGCCGGATATTGCTTTTTACTTAGCAATCTGGACAAGTGATGC TACTGAAAGCTAATCAAAATATACAAGCTTTTGTCTGCTTCCTTTCTCCTTCCATATTTTCTTACAGAGTGGAAGGCTGATGTTTTCCAAATTTTGTAGT TGTATGGTATGATGGAAAGTAATGTACTGTAATTGTAATGGTTTTAGGTCACAGGGTTTATGATTTGGTTAATTATAATTGCAGAAATCTGTGTTGTTGT TACTTGTACCATAACCAAAATTAAGTATGAATTTATGGATTAGCTTGTTGTAACTTAACAGTTGCAGTGAGCAATCAGTGAATGATTATTGCTGTTTGGC TTTCTGTTTCATGTTTTGTTTGGAGACTGATAAAATGTTTTAGTCATAATTTCATTTAGAGCCGGGGTTCCAAATATTCAGCAGC
• Tissue: flowers
• Gene name: LI_gene_40494;
• Additional information: details;

Expression of Ll_transcript_44224

FPKM

• FPAB: 10.1
• FPNAB: 8.1
• LF1: 7
• LF2: 6.3
• LF3: 8.2
• LF4: 6.8
• UF1: 4.5
• UF2: 7.9
• UF3: 8
• UF4: 7

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_44224

• Blastp: Nuclear pore complex protein NUP1 from Arabidopsis with 38.73% of identity
• Blastx: Nuclear pore complex protein NUP1 from Arabidopsis with 38.51% of identity
• Eggnog: nuclear pore complex protein(ENOG410XPV4)
• Kegg: Link to kegg annotations (AT3G10650)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461146.1)
• Pfam: Nucleoporin FG repeat region (PF13634.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;