| Id Trinity | FTRINITY_DN54189_c1_g2_i7 |
|---|---|
| Name Transcript | Ll_transcript_44232 |
| Sequence | CGGCGATATTAAAACCCTAATTTGCGATCTCTGCATTTCTCTCTTCTCTTCCCTTCTCTTTTCCTCGCAGCAATGGCACCCGAAGAGAGAGAGAACCCAT ACGAAGGTTTAGGAACCGGTGGCAAATTCCGAAAACGCCCTTTCCGAAGAACCCAAACAACACCCTATGATCGTCCTTCAACATCACTCACAAACCCTAA CAGAAACAACAACAACAATAACAACAATGGTTGGTTTTCAAAGGTTGTCAAACCCGCTCGTAAGTTAATCACTTATAGCGCTCATTCAATTTTCTCCTCC CTTTTCCGTAAGCGCCTCCCTCAATCTCAATTTTCAGGCACAGAAACAGAACAAGAAGTGAGAAACAATCATCTGGAAGAATCTGCATTTGTTTCAATCA ATTCCTCAGGCAAGAAACAAGTAACTGTTGGTAATGGTGAAAGTGATGCTCAAATTAATTGCCCTGATGGAGGTGGATTAACTGAACTTGAGAAGTTACT AAGACAGAAGACTTTCACCAGATCCGAGATTGATCATTTGACAGCACTTATGCGCTCAAGAACTGTGGATACACCTATTAGGGAAGAAGAGAAGCGCACA GAAGTGGTTCCTTCCGAACCAATGTTGTTTTCCGAACTAAAGGATGAAGATCCCAAAACACCCATAGTTGAAAATAGGATTGAAAACCATCTTCCTCTAA CCCCATATGTTACTTCCAGTGTTCCTATTGAGGATGTTGCTTCACCTGCAGAGCTTGCAAAAGCTTACATGGGAAGCAGGCCTTCCAAGGTATCCTCATC AATATTTGGTATGCGAAGTCCTGCAGCAAGGGAGGATCCAGCTTTTTTAAAAAGTAATGATAACCTTCCTCTTAGCTCCCCTGTTATGTCAATTGTGCCA AGGACTGTTAAACATGTTGGGGTTCATGAAAATGGTTATCCAACCGCAAGAACTCGTGGAAGATCTGCAATATATAGTATGGCTCGAACACCTTATGCCA GAATTTATCCAACCTCTAAGGGGATTGGGCGTGCTGTTGAAGGTGAGCCGTCATCTTCAACTCACTCTACGATGGATCAGGACATGCTTTATGGATCTAA ACAAGGGGTATAACTGTTTGGGATTATAGTCATGTCTTTGAGTGTTGATTTTAGGCACATCACTAGATTTTATGTCGTGTTTTACTTCTCATCTTTTGCA GTCAGTAAAGCGTAGAAGTTCAGCATTGGATAATGATGTAGGATCTGTTGGTCCTATACGTCGAATCCGTCACAAGGCTAATCTATATTCTAAAGGCTCG GGCTTACCTCCTTCTGGTAGTTCTCTATCTATTGCTAGGAGTGGACTCGGTGTTGGTGCTCCTCAACAACCCTCATCTTCCATGCGGAAGCCTATCATGT GGGATGAAGTTAAGCATAGCCATATGGATTTACCAGAAGAAAATGTGCAAGACACTAGACCTAGTAAGAGTGGCCCTTTACCCTCAAAATCCAGCGAGAT GGCTTCGAAGATATTGCAGCAACTTGATAAGATGGTTTCCCCTAAAGAGAAGTCATCTGAATCAAGGCTACCAAATGTGAATGATAAATCATCAACGAAG TTGTCCCCTTCCATGTTACATGGACAGACTCTTCGAAGCATGGAAGCAGTAGATTCATCAAAATCGCTGGATACTGTAAAAGATAATAGATTCAATATTG CACCTGGAAAGTTGTCTGATAGTGCTCAAAAGTTAGCTTCACAGATAGACAAGGTTGAAAATGGTCATTTGAAGCTTCTTGCTCCTTCTGATGGACTTGT TCCATCTGTAACTAATGCAGATTCCAGAAATCCAAGGAATCAAACCAATTCTGCTGCGAAGTCCGTGGATTCTTTTGTGGTAAAATCTGCTTCATATCCT CCACAAAAGAAGAGAGCATTTCATATGAGTGCACAGGAGGATTGTCTGGACATGGATGATGATGCTTATTCTAATGGGGATATGTCCTCTGTTCTTCCCG TTGATAACAAGATGACAAGTCCCAATGCAATGACAGTGAAGGATACCTTTGGTACTGAATCCGTTGCACAGGAGAATACCCGATCATTATCTGCAGTAAT GGCATCCAAAAGTTCTACAATAAGTGAGGAAGCTCATGATAGGACTGATGATAATGCTGATGGGTCTAGGGTCGGTGCGAAAGTTGATGTATCAACCTCT TTGACATCATCTATCTCCGATCCAACTTTTAAGCCAGCTACAGCAACTACAAGAACAAGTTTTGGTTCCCACAAATCTGCTTCACCAAATGGATCAAGTG CTATTCCTCCAGTCTTTAATTTTGAGCCATCAAAAGACATAACCAACTCTGGTACAATATTTGGTTTGGAAAAGGTTGTTTCATCAAAGGGGCTTGATGC TGATGTTCCATTAGTGAACTTTGGCAGCATTGGAAATGCTGGCAAGGTCCCCCAAATGCTATTTACTTCATCACCAGTTGTTGGTGAATCTACTTTGCCG AATTCAGGTGCTTCTTCTGACTCAAAGCTGGGGAGCTCGATCAGTTCTGCCACTGTTTCTGCTGCAACTGATTCTATGCCAAAAGTTCGTGAATCTGGTA ATGTTGATGCTAAGACGAATATAGATTCTGTTAAGCCATCAGAAATTCCTGTTTCATCTGCAGTAACAACATCATTGTTCACACCACCAACAAGTGCATT TACTTTTGGCCAAAGTAATGGATCTCTTGCTGCAAGCTCTTCACTTTCCTCACCCTTTACCAGTCAGAATGTATTCAGCAGCTCACCTCTTGCAGCAAGC AGCAGCAGCATTAGTGCCAATAGCACTTCTTCCATAATTTCATCGAGCAGTAGCAGTTTCTCCAATCCGTTGGTGGCATCTTCATCTTCAATGACTTCCT CTTTCAAATTTGGTTCCTCTATTGTCCCATCAACAGGTTTACCTGTATCATCTTCTGTCTCAGAACCAGTGGAAACTAAGAATAGGGAAGTTGTAGGAAA TGGTAATCTAAGCAGCACTGTTTTTGGTAGCTCATCTTCTGCTGTTGGAAACACAGGGAGTGGCCTTTTTGGTTTCAGTTCCTCAGCGACGACTAGCCAG TCCCAGGGTTCTGTCATTGGTTCTAGCAGCGGATCAATGTTTACTGCTCAGGCATCTCCTGCTACCAGTGGGTTTGCAACTTCTACCCAGACCCAGTCGG TTCCACTTGGCTCATCGTCATCATCTTCATTTTTTGGGTTGACTGGGAATACATCCTTTTCATCTGGTAATTCATTGTTTCCTTCAACTCCTGCCACAAA TGCAGGTTTTTCTTTTGGGAGTTCATCATTTCCTTCTTCAAGTTCTGCTACAAACATTTTCAACTCTGGTACAACTTTTGGATTTGGTACCCCTGCTTCT TCTTCGGCAGTCAACTCTGTAAGCTCCAACAATGTTTCAAGTTCTTCTTTGTTTGGGTCTTCTAGTTGGCAGCCCAGAGAATCGTCTCCTTTTGGGTCCG CATTTAATCAAACATCTACTGCTTCTGTTGCTTCTACTAGCTCCCCCACAATGTTTTCGTCAACTCCTCAATTTTCATTCACTTCAGCAGCAACCACTAC CTCCACACAGCCTACTTTTGGAAATCCTAATTCTCCCTTCACATTTGGTTCAGCTCCTGTTAATAATGATCAGATGACTACAGAGGATAGTATGGCTGAA GACACTGTTCAAGCAACTCCACCAGCGACTCCTGTATTTGGTCAGCAAGCAACTCCACCAGCGACTCCTATATTTGGTCAGCAAGCAACTCCACCAGCAA CTGCTGTATTTGGTCAGCAAGCAACTCCACCAGCGACTCCTGTATTTGGTCAGCAAGCAACTCCACCAGCGACTCCTATATTTGGTCAGCAAGCAACTCC ACCAGCAACTGCTGTATTTGGTCAGCAAGCAACT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_40494; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_44232
| Blastp | Nuclear pore complex protein NUP1 from Arabidopsis with 37.55% of identity |
|---|---|
| Blastx | Nuclear pore complex protein NUP1 from Arabidopsis with 40.39% of identity |
| Eggnog | nuclear pore complex protein(ENOG410XPV4) |
| Kegg | Link to kegg annotations (AT3G10650) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019461147.1) |
| Pfam | Nucleoporin FG repeat region (PF13634.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |