| Id Trinity | FTRINITY_DN54189_c1_g2_i9 |
|---|---|
| Name Transcript | Ll_transcript_44234 |
| Sequence | TTTATCATCCGCTCATTTTCTCTCTCTTCCGCTGCGTTTCTCTCCGATTTTAAAACCCTAATTTTCAGTCTCTGCACTTTCTCCTTGAACCTCCTCACGA ATCAACACACCTTTCTCCCTCTGTCACTGATGGCAACAGAAGAAAAAGAGAACCCATATGAAGGGTTAGGAACCGGTGGCAAATTCCGAAAACGCCCATT CCGCAGAACCCAAACGACGCCGTACGATCGACCCTCAAATTCTCTCAGAAACCCTACAATAAACAACAACAACAACAAAAAAGGTTGGTTTTCAAAGGTT GTCGATCCTGCTCATAGACTCATCAGTTATAGTGCTCATTCTCTTTTCTCCTCTCTCTTTCGCAAGCGCCTTCCACCCCCTCAATCCAACGCTTCTTCTT CGGGTGTGGAAATAGAACAGGATGTGAGGGTCAGTCATCAGGAAGAAACCGTGTTTGTTTCGAACAATTTTTCTGGCAAGCAACAAGGAGCTGTTGGTAA TGGTGAAAGTGGTGCTCAAATTAATTCCTCTGATGGAGGCACACTAACTGAACTTGAGAAGTTACTAGGACAAAAAACTTTTACCAGATCTGAGATTGAT CACTTGACAGCACTTATGCGTTCAAGAACTGTGGATGCGCCTATGCGGGAAGAAGAGAAGCGCACAGAAGTGGTTCCTTCTGAAGCAATACTGTCTTCTG AGCGAAAGGATGAAGGTCCCAAAACACCTATAGTACAAAATAGGGTTGAAAACCATCTTGCTCTAACCCCTTATGTTACTTCGAGAGTTCCTAGTGAGGA TATCGCTTCACCTGCAGAGCTTGCAAAAGCTTACATGGGGAGCAGGCCTTCCAAGGTATTCTCATCAATGTTAAGTGGTCAAAGTCCTGCAGCAAGGGAG GGTCCAGCTTTTCTAAACAGTGATGATAACCTTCCTCTCAAATCCCCTATTATGTCAATTGTGCCAAGGACTGTTAGGCATGCTGGGGTTCATGAAAATG GTTTTGCAAACCCAAGAAATCGTGGCAGATCTGCAATATATAGTATGGCCCGAACACCTTATGCCAGAATTTATCCAACCTCTACCCTCAAGGGGGTTGG ACATGCTGAAGGTGAGCCATCATCTTCAACTCACTCTACATTGGATCATGACATGCTTTATGGATCTAAACAAGGGTCAGTAAAGCGTAGAAGTTCAGCA TTGGATAATGATGTAGGATCTGTTGGTCCTATACGTCGAATCCGTCACAAGGCTAATCTATATTCCATAGGCTCAAACTTACCTCTCTCTCGCAGTTCTC TATCAATTGCTAGGAGCGGACTCGGTGTTGATGCTGCCCAGCAACCCTCATCTTCCATGCAGAATCCTATTGTGCTGGATGAAGATAAGCATAGCCATAT GAAATTGTCAGAAGAAAATGTGGGCAACACTAGGCCTAATATGAGTGGCCCTTTACCCTCGAAATCTAGTGAGATGGCTTCAAAGATACTGCAGCAACTT GATAAGTTGGTTTCCCCTAAAGAAAAGTCATCTGAATCAAGGCTGCCAACTGTGAATGATAATTCATCAATGAAGTTGGCACCTTCCATGTTACATGGAC AGGCTCTTCAAAGCATGGAAATAGTAGACTCATCAAAATTGCTGGATACTGTAAAAGATGATAGATTCAATGTTTCACCTGGAAATTTGTCTGATAGTTC TCAAAAGTTAACTTCACAGATAAACAAGGTTGAAAATGGTTCATTGAAGCTTCTTGCTCCTTCTGGTGAATTATTTCCAGTTCTAACTGATGCAGATTCT ACAATACCAAGGAATCAAATCATCTCTAGTGTGAAGTCTGTGGATTCTTTTGTGATAAAACCTGTTTCATACCCTCCACAAAAGAAGAGAGCATTTCATA TGAGTGCACATGAGGATTGCTTGGACGTGGATGATGATGCTTATCCTAATGGGGCTGTGTCCTATGTTTTTCCTGTTGAGAATAAAATGACAAGGCCCGC TGCAATGACAGTGAAGGATACCTCTGGCACTGAAGCCGTTGTGCAGGAGAATACCCAATCATTATCTGTAGTAAGGCCATCCAAAAGTTCTACAATTGGC CGGGAGGCTCATGTTGGGGCTGATGATATAACTGATGGGTGTAGGGTAGGTGCAAAAGTTGATGTATCAACCTCTACGACATCATCTACTCCTGATCAAA CCTCCAAGCCTGCTACAGCAGATACACAAACAAGTTTTGGCTCGCGCAATCCTGCTCCACCGAATGGGTTAATTGCCATTCCTCCAGTCTTTGGCTTTGT GAATAAAGTGGCTCCACGAAAGGAGTTAACTAATTCTGGTTCAATATTTGGTTTGGAAAAGGTTGTTTCATCAAAGGAGTTTGGTGCTGATGTCCCGTTA GTGAACTTTGGTAGCAACGGAAATGCTGACAAGGTTCCACAAATGCCATCTACTTCATCATCAGTTGGTGGTGAATCTACTTTTCCGAATTTCAGTGTTT CTTCCAACTCTAAGCTGGGAACCTCAATCAGTTCTGCCGCTGTTGCTGCTGCAACGGATTCTATGCCAAAAGTTCTTGAGTCTAGTAATGATGATACTAA GACTAATACAGGTTCTGTTAGGTCTCCAGAACTTCCTGTTTCATCGGCAGCAACGACACCATTGTTCACATCAACAGGTGCATTTACTTTTGGTCAGAGT AATGGATCTCTTGCTACAAGCACTTCACTTTCCTCTCCCTTTACCAGTCAGAATGTATTCAGTAGCTCATCCCTTGCAGCAAGTAGCAGCAGCATTAGTG CCACTAGTACTACTGCCATAATTCCATCAAGTAATAGCAGTTCCTCCAATCCGTTGGTGGCATCTTCATCTTCGCCAACTCCCTCTTTCAAATTTGGATC TTCTTCTTTCCCATCAACAGATTTACCTGTATCATCTTCTGGCTCAGAACCACTGGAAACCAAGAACATAAACAGTAATCTAAGCAGCACTGCTTTTGGT AGCTCATCTGCTGCTGTTGGAAGCACAGGGAGTGGCCTTTTTGGTTTCAGCTCCTCGGCAATGACAACTATAACTAGCCAAGCTCAGGGTTCTGTTATTG GTTCTAGCAATGGATCTTTGCTTAATGCCCAGGCATCTTCTGCCAGCAGTGGGTTTGCAACTTCTACCCAAACCCAGTCAGTTCCATTTGGTTCATCTGC ACCATCTCCATCATTTGGGTTGACTGGGAATACAGCCCTTTCTTCAGGCAACTCCTTGTTTCCTTCTGCAACTCCCGCCACTAATGCAGCTTTTTCTTTT GGGAGTTCATCATTTCCTTCTTCAAGTTCTGCCGTAAACATTTTCAATTCTGGTACAACTTCTGGGCTAGCTACCTCTGCTCCCTCTTCAGCGGCCAACT CTGTAAGCTCCAACAGTGGTACGAGTTCTGCTTTGTTTGGGTCTTCAAGTTGGCAGCCCAGCAAATCGTCTCCATTCGGGTCCACATTTAATTCTTCATC GTCTCCATCTGCTTTTGGACTTGGTACCTCTGCTTCCTCTTCAGCAGCGGCCAACTCTGTAAGCTCTAGCAGTGGTACAAGTTCTGCTTTGTTTGGGTCT GCTAGTTGGCAGCCCAACCAATCTTCTCCATTCGGGTCCGCATTTAATTCTTCACCTTCTCCATCTGGCTTTTCATTTGGAACATCTGCTTCTGTTCCTT CTAGTTCACCCACTATGTTTTCGTCAACTCCTCAATTCTCATTCACTTCAGCAGCAGCCACTACCTCCACACAGCCTGCTTTTGGAAATCCTAATTCTGT CTTCACATTTGGTTCAGCTCCTGTTAATAATGATCAGATGACTATGGAGGATAGTATGGCTGAAGACACAGTTCAAGCAACTCCACCAGCGATTCCGGCA TTTGGTCAGCAACCCAACCCGTTCGGAGCATCAACTCCATCAGGAGCCAATCCTTTCCAGTTTGGTAGTCAACAGAATGCTACTCCGCCAAACCCTTCTC CGTTTCAGGCTTCTGGCAGCGTAGACTTTAGTGGCGGAGGAGGTAGTTTCTCATTAGGCACAGGTGGTGGTGACAAATCTGGTCGAAGAATTGTGAAAGT TAAAAACAGGCAGCGTAAGAGGTAGGACTATTGTTTATGGAAATGATTACTTTCTACGACCATTGCAGGCTGCACTTAGCGTGACAAAAAAGTAATCTCC ATAGAGTGATTGCTGGATATTGCTTTTTTACTTGGCAATCTGGACAAGCGGTGCTATTGAAAGCTAATCAAAACATGCAAGCTTGTGAGTTTCTTTCTTC CTCCATATATTACAGAATGCAATGCTGAAGTGTTCCAAATTTTGTAGTTGCATGGTATGAGGGAACATAATGTACTGTACTTGTAATGGTTTCAGGTCAC AGTATTCATGATTTGGTTAGTTAAAATTGCTAAAATCTCTGTATTCTTGTTACTTGTATCATACCAAAATTATGAATTTATGGTGTAGCTGGTTGTAACT TGAAGTTCCAGTGAGCAATCTGTGAGCTATTATTAGCTGCTTCTGGTTAGTCATAATTGATTTTTACTTTGCTAAGTAACCACAGCATGAAGAATATTTT GCTGAGTTTAGTAAAGATAAAATAATAGGAACGAAATTATTAGACTGATAATTACTAGAAATCAAAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_40494; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_44234
| Blastp | Nuclear pore complex protein NUP1 from Arabidopsis with 41.42% of identity |
|---|---|
| Blastx | Nuclear pore complex protein NUP1 from Arabidopsis with 41% of identity |
| Eggnog | nuclear pore complex protein(ENOG410XPV4) |
| Kegg | Link to kegg annotations (AT3G10650) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019427905.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |