| Id Trinity | FTRINITY_DN54191_c1_g2_i11 |
|---|---|
| Name Transcript | Ll_transcript_42937 |
| Sequence | CAACCTCATTCTCAGTTTCTCCTATGTTCTTCTTTCATGGTTGATGATGTTCACCAAGTGGGTCCCACGTTTCATATCAAGTAAAAAATGGAACTTGAAC AATGTGCAATGTTTTTCATCACCCACAAGAGTGAAATCTCCTCTAGAAATGGCTTCAAAGCATGGTGAACTAAGAGTCTTCATTGTTGCTGGAGAAGTTT CTGGAGATTCCATTGCTTCTCGTCTTATGGCTTCTTTGAAACTTCTCTCACCTTTACCTCTTCGTTTTTCTGGTGTTGGAGGGTATGTTTCTAACCAATT ATGAACTCTAATCATATACTTCAATTATCTCTCAAAGTTATATTATTTTGAATTATGGGTAGTATATTATAGATGCAATCAGTTATTTTTTTATTTATCA ACAAATCGTTGGTCTAGTAGTGTAAGTCTATAAGGGTGTAATGCCGACTAGATACTCAGAAAAGCCAAAAGGTTAATGTTTTGATTCCCGGGAGCGACAC TTGTTGGGGAATGAGGATCAGCTTTCCCACATTCTTGTATCCTATTGTGTCTCAATCCAATGAAAAGTTGCTACCTATTTGAAAAAAATAGAAGAAACAC AATAACATTTTTATGTTATTTGGTGAGATATGATTGGCTCGGGACATGGAGACAGAAAATTTTGGAACAGAGGATCTTGGTTCCTTGTTGGGAGGAACAA AGGGATTTGCTCGTTACCCGAAGGGCTAAAATGTCCAGTGAAGGATTGCAATCTTTGTTCCCTATTGAGGACATCTCAGTAATGGGAATTTGGGAGCTAT TACCGCATTTGTATAAATTCAGAGTAAAATTAAAGGAAACTGTAGAAGCAGCTGCTATATTTGAGCCTCATGTAGTAGTAACAGTTGATTCTAAAGGCTT CTCTTTCCGGTTCTTGAAGCAGCTAAGAGCTATATACAGTCAGAAAAAGTTGTATTCAGCAGCACATTTTCACTATGTTGCACCCTCATTCTGGGCATGG AAAGGAGGCGAAGCAAGACTCAGAGGACTAGCATCGTTTGTGGACCATCTATTGTGCATACTTCCGAATGAGGACAAAATCTGTCGGTTGAATGGATTAG CTGCAACCTTTGTTGGGCATCCTGTCCTTGAAGATGTTCTAGAGTTGAATTTGAGAAACAATTCCTCGGTCCAAGAACGGAGGGCTGAAGGAAATGCTGA AGACTTCCGAACTAAACATGCAGTGCCCTCAGGAGCCACTGTTGTCAGCTTGCTTCCCGGAAGCCGAGTACAAGAGGTGACTCGAATGCTTCCCATCTTT GCAAACACGTTCGAACTCCTGAAAGACACTTTTCCGAATTTGATGACTGTCATTCATGTTGCCCCTAATGAGCATGTGGAGAATTTCATTGCTGGTGCTG TTCATAGATGGCCTGTACCTGTTGTACTAATTCCAGGAGGAACAACACAACTGAGATATGATGCTTTCAGTGTAAGCACTATTGACTCACTAAATTTACA TTTCCGGAGAAATTTTTATGAACTTGTTATGTCGAAAACGTATAATAGTGGCGGAGATTTGGTGTAACACTTCTGTTATAGAAATCTGGTTCTTCTGAGT AGAATGAGTACAGACTCTAGCTTTATCAAGTTTGTGTGGACACTGAAATAAGAAATATATAAATGCACATGAAAATTGGCACCATAACTGTTGA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_40508; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_42937
| Blastp | Probable lipid-A-disaccharide synthase, mitochondrial from Arabidopsis with 62.4% of identity |
|---|---|
| Blastx | Probable lipid-A-disaccharide synthase, mitochondrial from Arabidopsis with 62.4% of identity |
| Eggnog | Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell (By similarity)(COG0763) |
| Kegg | Link to kegg annotations (AT2G04560) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019462594.1) |
| Pfam | Lipid-A-disaccharide synthetase (PF02684.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |