| Id Trinity | FTRINITY_DN54205_c2_g3_i1 |
|---|---|
| Name Transcript | Ll_transcript_273004 |
| Sequence | AAAGAAGACAGAGAGGTAGATCTATATCTAAGAAAGATCCGATAGCACGTTCATTCATAGTAGGTAGTGGTTTCAGACGCATTTTCCACTGGGTGCACAT CTGTAACATAATGTGTGTTCATGTGCCATTCATTTTCATTTGTTCAAAAAAAAATATTTAAGTTAAAAAATTAATAATTAATTATTTTCTCATTGATCAT AAATTGTGACACGTGGAGTGATACACTTCTGTGGGATAGATGTTCATCATTTACAGTTGAAATGAATGTGAACGTGAAGTTATTGTTATTTATTACACTG AAATGAATGTGATGCTATTATTACACTGAAAAGAGAGAGAGAGAGGGAGAGAGATAGAGAGAGAGATGGAAGAGTCGAAGAAGAAAGCAACGATTCTGAT AACAAACGACGATGGAATAAACGCTCCTGGTTTAAGAGCATTGGTTGAGAGTCTGGCGGAAACGAATGAATTCAACATTTATGTAATCGCTCCAGATAGT GAGAAGTCATGTATTGCTCACTGCATTACTTGGCTTCACCCTCTACATCTCAACCTTACTCATATTCATGGAACCATCTCTTCCTTTTCCGTTTCTGGTT CTCCCGCTGATTGTACTTCCCTCGGAATTTCCAAAACACTCTTTCCCACTGTTCCTGATCTGGTTATCAGTGGCATAAACAACGGTGACAACACCGGCTA TGACATTTTTTACTCAGGCACTGTAGCTGGAGCTCGTGAGGCCTTCTTCAATGATATACCTTCTATGTCCATTTCTTATTACCGCCCTGATTGGGCTGAG GGTAATAGTAAGATACATGACTTCATCCTTGCTGCACAAGTATGCGTGCCTATCATACGTGCTGTTCTGGTTGAGATAAAGAACCAAAGCTACCCTCGAA GATGTTTTTTGAATATAAATGTGCCAAACAATGTTGCAAATCATAAGGGTTATAAGCTGACCAAGCAGGGTAAAAGTATTTGCAAAATGGGATGGAAGCA AGTCACCTCTGAGACAGAAGGACAGAGAATGTCATCTAATAGGACCAATATAAATACAGAACCACCTAAAAAAAATGGCACAGTATCATCTGTATCTCCA GAACATCTTTTGTTTCTGAGAGAGGTGGGTTCATTTACTGTCTTTTTATTTACTTGAATCTCGATATTTCATTTATAAGTAGGCTATCATCCAGTACCTT CAGATGAACTCCTCTATTTGTCATAAGTTCTGCATACCTTCGTAGTCTTGAGCTTCAGTGTACTTGTTTTAGTCAGTCTCAGAAGGCACTGTAAGTGTCA GTTTTGTCAACTTCTGAAGTAGATGCCTAGTTATATTGGAAAACTTAAGTCCTTTACCATCTTAGTTGGATTGACATTCCTAACTAACCTTAGTTCCCTC CTCTTTTTCCCAAAGAAAATAAGACAGTACTTTTTTAACTAATGCAGGTAATAGGTTATACACTTGATGATGATGATGGTACCGAGTACAAATCTTTGCA AGAAGGATATGTGAGTATATATAATATAAAGACATACTAAATTAATTTCATACATAAACTGTGACTAACATGGTAAGCATTTTCATTTTCTCTTAAGATT ACTGTGACTCCTCTTGCTGCTCTTTCTGATGCGGAGTTCAATTGTCAGACCTTTTTTAAGGAATGGCTAGGAAGTGTCTCTGAACTCTCCTCTTCATCGG CATTATAATGTTGTAAGAACTATCATGTGTTTGTAGCTTATATGATAGCTTTAGTAATATTTTCAACAAATGTAGCTTCCTTTCTAATTTGTGGTGAAAG TGACTCTTGATAGATGAACGGAATATTTAAGCAAGGTTTTAAATAAAATAGTGTGTTGTAATGACATTACAGAGCCAAGTTATTATAGTGAGGGTGTAAT TGACATAGTATTGGTTGCTATTGTGTGATTTTGAGCCATGTACCCCATCCCCATTCCATTGAGTTTTGCTACAACGGGCAGGTTTCACATATCATCTCTC CCTCTTTTTATATTAATATATGTA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_40648; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_273004
| Blastp | 5'-nucleotidase SurE from Sulfurimonas with 42.02% of identity |
|---|---|
| Blastx | 5'-nucleotidase SurE from Sulfurimonas with 42.7% of identity |
| Eggnog | Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates (By similarity)(COG0496) |
| Kegg | Link to kegg annotations (Suden_1536) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_013453323.1) |
| Pfam | Survival protein SurE (PF01975.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |