| Id Trinity | FTRINITY_DN54205_c3_g2_i4 |
|---|---|
| Name Transcript | Ll_transcript_273024 |
| Sequence | CACCTAACTAACCAAAACCAAATCCAATCGAGATCTCTGTTTAAAGGGTTTCTTCCAAATTGGACTGTGTGGCAATCTACCCACTTCTATTTCTCCCTTA TCCCTCTCTCCCTCTCTCCCTCTCTCCATGGCCACCGTCCTCAGAATTCCCACCTTCCGCCCACAACCGCCGCCACGCGCCTCCTCCAACTCCTTGAACC CCTCCTGCGTTGCCGTCGTGTCTTTCAGACAAAGCGCTTCCTATAGTACAAGGCCTTTATCACTCACCTCTCTGCGGTTAGCTAAACTTCAATCCCTGCG CTTCGCCAACTTCGTTCCTTTTGCTTTCGACGCTGACACTGAAGCCCCGCAAGTTCAGGAACCCGAGATTCAGGAGTCACTAGATGGTGCTGTTAGTGTG GAGAGCATTATAAATGAGGACGAGGTTAGCAATGTTGATGAAACACCTGCTTCACCTTTCCAAGTGTTACTGCAATCTTACAAAGAAGCAGTAGCTAATA ATGATGAAGCCAAAGTTGCTGAGTTGGAATCATCTTTAAAATCCATTGAAGATGAGAAAATAGATCTTGAAGGGAAAATAGCTTCTTTATCTGAAGAGTT ATCTATAGAAAGGGATCGGATCCTAAGGATTAGTGCAGATTTTGACAATTTTCGGAAGAGGACTGAGAGAGATCGCCTTTCACTGGTCACAAATGCTCAG GGGGAAGTTGTGGAGAGTTTGTTAGGGGTATTGGACAATTTTGAGAGGGCAAAATCTCAGATTAAGGTGGAAACAGAGGGAGAGGAGAAAATAAACAACA GCTATCAGAGCATATATAAACAGTTCAATGAAATTCTAACCTCACTTGGAGTCAAACCAGTGGAGACAGTTGGAAGGCCCTTTGATCCATTGGTAAGTTA AGTAATAATTTTAGTTTATAGTGGAATTCTAATCTGTGAGGCTTTCAAAATATATTATTGTTATCTTGTAGGTGATAACATTTTGTACAAAACTGAAAAC CGTGTAGGTGTTAAATTTAATTTCAGTTATTTGGAGTGCACTGACACTTATATTACATTCTCTTGGTATAAGATGTCTGTTTGACTTCTTGCCCACAGAG TTCTAATTTTTGTCACTTTTCTCCACAATGAATTTTTTGGCATAATGCTGTCATCTATTTATTGATGCAGGCACGCAAACCAGTTGGCTCGAAATTCAAT CGTGTATTTGATGAACTTTTTCAAACAATTTCTCAAGTCGGTTCAGGTTTCCTGAAGACCTGGATACGGTTTTAACCCAAACCAATTCTTGATTGTTTCG AGCCAACTTGGTGAGTTTAAAAACTGTACCAAAACTTGTCAAGACAAAAAAAAACTCTTGTAGAATATTTATGAAAATCTCAACAAGTATTCCGAAAGAA TTTCAGTTGATTTTTAGGATGATTTGACTTGGAAAATGTTGCATCAGCTACTGCCTTGAATGAAAAACTAGACGCCTGTGATCCTTTTCATGAAATTTCA TTTGATGGTTTTTAAAGGCATTGGAGGTTGATACTATACTCAGTAAGAATTTTTTGATTGACTATAATTTTCATTTCCTTGTAAAAGCTGCACGAGGCAA TCATGCGTGAGGATTCCGCAGAATTTGAGGATGGTATCATACTTCAAGAATTCAGGAAGGGATTTATTCTTGGCGATCGACTCTTGCGTCCGTCAATGGT GAAGGTATCAGCTGGTCCTGGACCTGCAAAGCCTGAACAAGAAGTGGCACTAGAAGAACAAGTGACAAGTGAAATATCTGAGGGTAGTGTAGAGAATGAG GGTAGCACAGAAGAAGAGTCTGCTTGAAAAGTCAATTTTTTTTTGCCTGCATTCAGTTTTGTAAAAGTATTACTCAGTTTAATCACCAGGAACATAATGT TGAGTGTACAAGTTGCTCAAAAATATTGCAGCTAAGAGAAAGTTATTACTGTCTTGAATTTTTTATTTCAAATTTTCATGTCCCTTGGCAAAAATGATTA TATTTATACCAGGAGTTTGGAGTATTATCTAAGTGTGAACTTTTCTCGAAAGCCTTAAATATACGAACCAGGCCGATTATTTATCTCTTAAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_40652; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_273024
| Blastp | Protein GrpE from Thermosynechococcus with 45.37% of identity |
|---|---|
| Blastx | Protein GrpE from Thermosynechococcus with 38.62% of identity |
| Eggnog | Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ(COG0576) |
| Kegg | Link to kegg annotations (tlr1314) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458622.1) |
| Pfam | GrpE (PF01025.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |