| Id Trinity | FTRINITY_DN54211_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_273963 |
| Sequence | CAAGCTGGCCCATTTAGGATGGAACATACATGTGGTGCATGCAAAGGAACTGGCAAAATTGTATCAGTATGGTGCTTATGTTCTAACTTTTTTCAGATTA GTTTTATCATTTTTAGTATAATGTATAGTAGTTCAGATATGGAGTTAACTGTGATCTACATAGTACAGACATGGATGCATACCCATAAATCATAATTGCC ATGGACACTGCATGGGTGTCTATATATTTATATTCATTTGTTTGTTTAAGGAAAACGTTCATGGTTCATAATCTCTTGTACAGGCTTCAAGATTTTCAAT ATCTTGATGTGTTGATATTTCTATTGTGATCCACATAGTACAGACATGGGTGCATACCCAAAACTGCCATAGACACTGAATGTGTGTCTATATATTTATA TTCATTTGTTTGTTTAGCAAAAGCATTCATGGTTCATAGTTTCATATATAGGCTTCAATTATTTTCAATATCTTGATGTGTTGATATTTCTATTCTAAAT GGCTATGTACATGCAGTGTTTGCACATGTGCCGTCAGCCTGCTATGTTTTAGCCATATTGTTGCCAAAGAAGAAATAAATTTTTAGTTGATTAGTACAAA CATCTATGATATGGACATATTTTGTACAGGCATTGTGTGAGACACATGTTCAACACACGAACACAGCATCAAAATGGTGTCTGTGGTCTATAGGCTGTTA TTCACTTGCTTGTTATCTTATTTTCTTCTTACTTGGTTGTAATCCATCTTTAAAGATTTCTTGTCTCCCATCCCCTTCATTTTTATAAAATAAAACCATG CAGGATATATCTACGTCGGACTTTAATAGCAATAACAGATAGAAATTATTAATGATTTTGTTTTTCCTTATTGGCCCCAGAGTTTTTGCAAGTCATGCAG GGGTGCAAAGGTTACCAAAGGAACAAAGTCAGTCAAGTTGGATATTATGCCTGGGATGGATAGCAACGAGATCTTAAAGGTTTATAGAAGTGGTGGTGCA GATCCTGATGGAAATCACCCAGGTGATCTTTATGTTACTATCAAGGTCAGGGAAGATCCTGTTTTCCGTAGAGAAGGATCTAATATTCATGTAGATGCTG TTTTGAGTATCACTCAGGCAATTTTAGGTGGAACCATTCAGGTCCCTACTCTTACTGGAGATGTTGTTCTTAAGGTTCGTCCTGGCACCCAACCTGGTCA GAAGGTGGTTCTGAAAAAGAAGGGAATCAAGACAAAAAATTCTTACAGTTTTGGAGATCAATATGTTCATTTTAATGTCAGCATCCCCACGTGAGTGTTA CATTTGATATTATGGCGTGGTTTATGATTTATGAACTGCTAACTTGTTTTGCTCTCCTGGCATTAAAATTACCCCAGGCTCCGGTTTTTACAGTTAAGAC AGTTTGTGTTGAATGTTTAGAACATGAACATAAGTGGGTGTTTTTGTAATGTTTTGCAGAAATCTGACAGAGAGGCAGCGTGAATTGATAGAAGAGTTTT CTAAGGAAGAGCAAGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_40684; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_273963
| Blastp | Chaperone protein dnaJ GFA2, mitochondrial from Arabidopsis with 78.95% of identity |
|---|---|
| Blastx | Chaperone protein dnaJ GFA2, mitochondrial from Arabidopsis with 76.64% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (AT5G48030) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437114.1) |
| Pfam | DnaJ C terminal domain (PF01556.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |