| Id Trinity | FTRINITY_DN54211_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_273964 |
| Sequence | TTTTTCCTTCACTCCCACTAGAACCTTCCAATTCTTCAAAATTAGGGTTTATCGAAAGGGGGTTTAGCGTTTTTTATCACAACCACACATTCTAACAATC ATTGCAAAGCTTCAACCTTTCTCACTCACACGTACCTCCGCAACGTTCAGAGCTCCCAAATGGTTCGCTCAAATGGCCTCAAACTTCTTCACTGCGTTGC TCGTCGATCTCTCCCCGCAAACAAATCCATACATGAAACAATGTTCCGAAAGGGTTATAGGACATCGAATTCGGGACTTTGCAATCCATCTAGCGTTATC GGAAATCGTTCTTCAAATGTTGGATATGGTGTTAATTTGAAGAATTGGTTGCTATGGGGAGCAGCAAATACATATTGGGGGGCATCTAGGTCTATTCACG GCTCTGCACCATTGGCAAAAGACTTTTATGATGTTCTTGGTGTGAGTAAGAACTCTAGTGCTTCTGAAATAAAGAAAGCATACTATGGGCTTGCAAAGAA GCTACATCCAGACACAAACAAAAATGATCCTGAGGCTGAGAAGAAGTTTCAAGAAGTATCATTGGCATATGAGGTTTTGAAGGATGAGGAAAAGCGTCAA CAGTATGACCAGGTTGGCCATGATGCTTATGTAAACCAACAAAGCACTGGTTTTGAAGGAAACGGCGGCTTTAATCCGTTTGAGCAGATATTTCGCGACC ATGATTTTGTCAAGAGCTTTTTTCATCAGAATATTGGCGGAGAGGATGTCAAGGCATTCATTGAATTATCCTTTATGGAAGCTGTTCAAGGATGCACTAA AACTGTTACATTTCAAACAGATTTACTTTGTAATACTTGTGGAGGGAGTGGTGTTCCTCCTGGTACAAGACCTGAAACCTGTAAGCGTTGTAAAGGCGCA GGAGTGACATATGTACAAGCTGGCCCATTTAGGATGGAGCATACTTGTGGTACATGCAAAGGAACTGGCAAAATTGTATCGAGTTTCTGCAAGTCATGCA GGGGTGCGAAGGTTATGAAAGGAACAAAGTCGGTCAAGTTGGATATTATGCCTGGGATGGACAACAATGAGACCCTAAAGGTTTACAGAAGTGGCGGTGC AGATCCCGATGGTGACCACCCTGGTGATCTTTATGTTACTATCAAGGTCAGGGAAGATCCTGTTTTCCGTAGAGAAGGATCTAATATTCATGTAGATGCT GTTTTGAGTATCACTCAGGCAATTTTAGGTGGAACCATTCAGGTCCCTACTCTTACTGGAGATGTTGTTCTTAAGGTTCGTCCTGGCACCCAACCTGGTC AGAAGGTGGTTCTGAAAAAGAAGGGAATCAAGACAAAAAATTCTTACAGTTTTGGAGATCAATATGTTCATTTTAATGTCAGCATCCCCACAAATCTGAC AGAGAGGCAGCGTGAATTGATAGAAGAGTTTTCTAAGGAAGAGCAAGGGGAAAGTGATAAACAGAAAGCTGCTTCAGCTTCAGGTTGAACACACACTTTG AGAGCTGTTTCAGTAATATATATTACCAAATCATGGTCAAGTTTTGTAGGCTAATTAAATTATGGACTGGTATTCTTTTTAGTGTATGTAATATTTTTCG TCATAAGTGACAATGACCCACTCAAAATTTGAAGGTTATAAGGCAATCTTTTCGTGCAGCTTTTAAGATTCTAGTAATAGTACTCTAGTATGTGTTGTAT ATATATATATATATATCTTCTCTTAATAATATACATGGGGTGCATGCCACATTTTCATTATTTTTGCCTACTATCTTTATACATAAGAGCAGATGTATAT GGATCGâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_40684; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_273964
| Blastp | Chaperone protein dnaJ GFA2, mitochondrial from Arabidopsis with 59.04% of identity |
|---|---|
| Blastx | Chaperone protein dnaJ GFA2, mitochondrial from Arabidopsis with 58.82% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (AT5G48030) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019426254.1) |
| Pfam | DnaJ domain (PF00226.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |