| Id Trinity | FTRINITY_DN54211_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_273965 |
| Sequence | ACCAGGGATTGGGGAACAATGTCACTTTTTTTTATTTATCTACCCCTTCTTTCATTTGATTTATTTTAATATGGATATGTAGGTTGGCCATGATGCTTAT GTAAACCAACAAAGCACTGGTTTTGAAGGAAACGGCGGCTTTAATCCGTTTGAGCAGATATTTCGCGACCATGTAATGACTTACTACTTTCTTCCCTCTT TTTAGCTAATCATGTCTAATTATATTGTCAGCTCTTTATTAAACGGCCAATCTGCATTGTATTAGACACCAGTGGCTTAAGCAGTCATACAACCATCAAT TTACTAGTTTAATCAAAAGGTAAAATGGATATTGATTTTATAAAAAGCTGTAAAAATATGCATGATTAGGCAATCTTACTCTGTTATATGGTATAGAAGC ATGTTTGGTTATGCAATTGTAGTAGAACTTCATAATCTTGCTAATTAATTAAATGTCAAGGTCCCTGAAACTTGCTTGAGTTATTATCCCACATTTGAAG TCTAATATTATTTTCTTAAATACTCTGGCAATTCCCTCAATGGTGATCAGGATTTTGTCAAGAGCTTTTTTCATCAGAATATTGGCGGAGAGGATGTCAA GGCATTCATTGAATTATCCTTTATGGAAGCTGTTCAAGGATGCACTAAAACTGTTACATTTCAAACAGATTTACTTTGTAATACTTGTGGAGGGAGTGGT GTTCCTCCTGGTACAAGACCTGAAACCTGTAAGCGTTGTAAAGGCGCAGGAGTGACATATGTACAAGCTGGCCCATTTAGGATGGAGCATACTTGTGGTA CATGCAAAGGAACTGGCAAAATTGTATCGAGTTTCTGCAAGTCATGCAGGGGTGCGAAGGTTATGAAAGGAACAAAGTCGGTCAAGTTGGATATTATGCC TGGGATGGACAACAATGAGACCCTAAAGGTTTACAGAAGTGGCGGTGCAGATCCCGATGGTGACCACCCTGGTGATCTTTATGTTACTATCAAGGTCAGG GAAGATCCTGTTTTCCGTAGAGAAGGATCTAATATTCATGTAGATGCTGTTTTGAGTATCACTCAGGCAATTTTAGGTGGAACCATTCAGGTCCCTACTC TTACTGGAGATGTTGTTCTTAAGGTTCGTCCTGGCACCCAACCTGGTCAGAAGGTGGTTCTGAAAAAGAAGGGAATCAAGACAAAAAATTCTTACAGTTT TGGAGATCAATATGTTCATTTTAATGTCAGCATCCCCACAAATCTGACAGAGAGGCAGCGTGAATTGATAGAAGAGTTTTCTAAGGAAGAGCAAGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_40684; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_273965
| Blastp | Chaperone protein dnaJ GFA2, mitochondrial from Arabidopsis with 72.32% of identity |
|---|---|
| Blastx | Chaperone protein dnaJ GFA2, mitochondrial from Arabidopsis with 69.29% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (AT5G48030) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019426254.1) |
| Pfam | DnaJ C terminal domain (PF01556.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |