| Id Trinity | FTRINITY_DN54211_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_273966 |
| Sequence | TTTTTCCTTCACTCCCACTAGAACCTTCCAATTCTTCAAAATTAGGGTTTATCGAAAGGGGGTTTAGCGTTTTTTATCACAACCACACATTCTAACAATC ATTGCAAAGCTTCAACCTTTCTCACTCACACGTACCTCCGCAACGTTCAGAGCTCCCAAATGGTTCGCTCAAATGGCCTCAAACTTCTTCACTGCGTTGC TCGTCGATCTCTCCCCGCAAACAAATCCATACATGAAACAATGTTCCGAAAGGGTTATAGGACATCGAATTCGGGACTTTGCAATCCATCTAGCGTTATC GGAAATCGTTCTTCAAATGTTGGATATGGTGTTAATTTGAAGAATTGGTTGCTATGGGGAGCAGCAAATACATATTGGGGGGCATCTAGGTCTATTCACG GCTCTGCACCATTGGCAAAAGACTTTTATGATGTTCTTGGTGTGAGTAAGAACTCTAGTGCTTCTGAAATAAAGAAAGCATACTATGGGCTTGCAAAGAA GCTACATCCAGACACAAACAAAAATGATCCTGAGGCTGAGAAGAAGTTTCAAGAAGTATCATTGGCATATGAGGTTTTGAAGGATGAGGAAAAGCGTCAA CAGTATGACCAGGTTGGCCATGATGCTTATGTAAACCAACAAAGCACTGGTTTTGAAGGAAACGGCGGCTTTAATCCGTTTGAGCAGATATTTCGCGACC ATGTAATGACTTACTACTTTCTTCCCTCTTTTTAGCTAATCATGTCTAATTATATTGTCAGCTCTTTATTAAACGGCCAATCTGCATTGTATTAGACACC AGTGGCTTAAGCAGTCATACAACCATCAATTTACTAGTTTAATCAAAAGGTAAAATGGATATTGATTTTATAAAAAGCTGTAAAAATATGCATGATTAGG CAATCTTACTCTGTTATATGGTATAGAAGCATGTTTGGTTATGCAATTGTAGTAGAACTTCATAATCTTGCTAATTAATTAAATGTCAAGGTCCCTGAAA CTTGCTTGAGTTATTATCCCACATTTGAAGTCTAATATTATTTTCTTAAATACTCTGGCAATTCCCTCAATGGTGATCAGGATTTTGTCAAGAGCTTTTT TCATCAGAATATTGGCGGAGAGGATGTCAAGGCATTCATTGAATTATCCTTTATGGAAGCTGTTCAAGGATGCACTAAAACTGTTACATTTCAAACAGAT TTACTTTGTAATACTTGTGGAGGGAGTGGTGTTCCTCCTGGTACAAGACCTGAAACCTGTAAGCGTTGTAAAGGCGCAGGAGTGACATATGTACAAGCTG GCCCATTTAGGATGGAGCATACTTGTGGTACATGCAAAGGAACTGGCAAAATTGTATCGAGTTTCTGCAAGTCATGCAGGGGTGCGAAGGTTATGAAAGG AACAAAGTCGGTCAAGTTGGATATTATGCCTGGGATGGACAACAATGAGACCCTAAAGGTTTACAGAAGTGGCGGTGCAGATCCCGATGGTGACCACCCT GGTGATCTTTATGTTACTATCAAGGTCAGGGAAGATCCTGTTTTCCGTAGAGAAGGATCTAATATTCATGTAGATGCTGTTTTGAGTATCACTCAGGCAA TTTTAGGTGGAACCATTCAGGTCCCTACTCTTACTGGAGATGTTGTTCTTAAGGTTCGTCCTGGCACCCAACCTGGTCAGAAGGTGGTTCTGAAAAAGAA GGGAATCAAGACAAAAAATTCTTACAGTTTTGGAGATCAATATGTTCATTTTAATGTCAGCATCCCCACAAATCTGACAGAGAGGCAGCGTGAATTGATA GAAGAGTTTTCTAAGGAAGAGCAAGGGGAAAGTGATAAACAGAAAGCTGCTTCAGCTTCAGGTTGAACACACACTTTGAGAGCTGTTTCAGTAATATATA TTACCAAATCATGGTCAAGTTTTGTAGGCTAATTAAATTATGGACTGGTATTCTTTTTAGTGTATGTAATATTTTTCGTCATAAGTGACAATGACCCACT CAAAATTTGAAGGTTATAAGGCAATCTTTTCGTGCAGCTTTTAAGATTCTAGTAATAGTACTCTAGTATGTGTTGTATATATATATATATATATCTTCTC TTAATAATATACATGGGGTGCATGCCACATTTTCATTATTTTTGCCTACTATCTTTATACATAAGAGCAGATGTATATGGATCG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_40684; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_273966
| Blastp | Chaperone protein dnaJ GFA2, mitochondrial from Arabidopsis with 70.34% of identity |
|---|---|
| Blastx | Chaperone protein dnaJ GFA2, mitochondrial from Arabidopsis with 67.67% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (AT5G48030) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019426254.1) |
| Pfam | DnaJ C terminal domain (PF01556.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |