| Id Trinity | FTRINITY_DN54211_c0_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_273972 |
| Sequence | TTCAAATATTAAATAAAGTTTAAACCTCGTCTCTCTCTCCTTTCTCCTCCACTCGCGTGGCTACTAGAGTCTTCTAATTCTTCAAATTAGGGTTTATCAA GAAGGGTTTTATTAATCACAAACCTTCAACTTTTTTCATCCACGCGCCTCCACAACGATTCTAACTCCAAAATGGTTCGCTCCAATGGCCTCAGACTCCT TCAATATGTTGCTCGTCGGTCTCTCTCTGCAAACAATTCCATATGTGAAGGAATGTTACGGAAGGGTTATAGGACATTGAATTCAGGACTTCGTAATTCG TCCAGAGTTATTGGAAGTTGTTCACCAAATGTTGGAGGTGGTGTTAATTTGAAGAATTGGTTACCATTGCGAGCAGCAAATACATGTTGGGGGCCATCTA GGTCTTTTCATGGCTCAGCACCATTGGCAAAAGACTTTTATGATGTTCTTGGCGTGAGTAAGAATTCAAGTGCTTCTGAAATAAAAAAAGCATACTACGG GCTTGCAAAGAAGCTGCATCCAGACACAAACAAAGATGATCCTGAGGCTGAAAAGAAGTTTCAAGAAGTTTCATTGGCATATGAGGTGTATTCTTGTTCT TGTTACTTCCTTAGAGGTTTTGAAGGATGAGGAAAAACGTCAGCAGTATGATCAGGTTGGCCATGATGCTTTTGTAAACCAACAGAGCACAGGTTTTGAT GGAAACAGCGGCTTTAATCCGTTCGAGCAGATATTCCGTGACCATGATTTTGCGAAGAGCTTTTTTCATCAGAATATTGGCGGAGAGGATGTCAAGGCAT TCATTGAATTATCCTTTATGGAAGCTGTCCAAGGATGCACTAAAACTGTTACATTTCAAACAGATGTGCTTTGTAATACTTGTGGTGGGAGTGGTGTCCC TCCTGGTACAAGACCGGAAACCTGTAAGCGCTGTAAAGGCTCAGGAGTGACATATGTACAAGCTGGCCCATTTAGGATGGAACATACATGTGGTGCATGC AAAGGAACTGGCAAAATTGTATCAAGTTTTTGCAAGTCATGCAGGGGTGCAAAGGTTACCAAAGGAACAAAGTCAGTCAAGTTGGATATTATGCCTGGGA TGGATAGCAACGAGATCTTAAAGGTTTATAGAAGTGGTGGTGCAGATCCTGATGGAAATCACCCAGGTGATCTTTATGTTACTATCAAGGTCAGGGAAGA TCCTGTTTTCCGTAGAGAAGGATCTAATATTCATGTAGATGCTGTTTTGAGTATCACTCAGGCAATTTTAGGTGGAACCATTCAGGTCCCTACTCTTACT GGAGATGTTGTTCTTAAGGTTCGTCCTGGCACCCAACCTGGTCAGAAGGTGGTTCTAAAAAAGAAAGGCATTAAGACAAAAAATTCTTACACATTCGGTG ACCAATATGTTCATTTTAATGTCAGCATCCCCACGAACCTGACAGAGAGACAACGCGAATTGATCGAAGAGTTTTCTAAGGAAGAGCAAGGCGAATGTGA TAAACAAAGAGCTGCTTCAGCTTCAGGTTGAAAACACACTCTGAGAGCTGCTTCAGTAATTTATTACTAAATCATGCTCATTGAAGTTTTGTAGGCTAAT TAAATTAAGTATTGGTATTCTTTTATCCTCCACTTTTGAGGGTAATTACCCGTCAAAACTTAAGGTTATAACTTATAAGGCAATCTTCTCATGCACCTAC AAGACCCTAGTATTCTGGTCTGTGTTGTATATATTTTCCTTATAATAATATACATTAGGGTGCATGCCACATTTTTATTATTTTTGCTTACTAACTTTAT AGAAAGGAACCTTTTGTTGTTACCTTAATTTTAAAAGATAATAATTCAATATTCTATTTTTGGTGTGCATCACAGATATTTGGTAACTATGTTGAAACTT GTTTGCATATGCATCCTACCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_40684; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_273972
| Blastp | Chaperone protein dnaJ GFA2, mitochondrial from Arabidopsis with 62.74% of identity |
|---|---|
| Blastx | Chaperone protein dnaJ GFA2, mitochondrial from Arabidopsis with 62.74% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (AT5G48030) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437113.1) |
| Pfam | DnaJ C terminal domain (PF01556.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |