Id Trinity | FTRINITY_DN54218_c3_g7_i1 |
---|---|
Name Transcript | Ll_transcript_274819 |
Sequence | TCAATGTGTAGAAAGGAAGTAGGGTTTTATATTTGTAGCTACCACTTCTCTTCACACTCTGAATCTTCAAACGCGCATCCATGGCAGAAACCAAGAAGCA AAAATCAATAGACGTAGCTAACCGCAGAAAACTGAAAACAAAACCAAATCACAATTCAAAGAATCTCAAATCCTTCAAATCCAAAACTCAACGCAAAAAA ACCGGTCCTCGTTTACCTTCAATACTTAAAAAAGAGGTTGAACGTTTCAACGCTAGTACCAACTCTTTCGGTAGCGATGATGAAGAGATAAAGTCTGTGT ATGAAAACGGAGAACGAGAAATTTTGGTTGAGGATTTGTATGAGTATGAAGAAGAACATGCTGAAGAGGAATCGAAGAAGAACAAGCGTTATGATGCTGG ATCTGTTGATAAACTTGAATATGAACTTCCTGATGATCTTTCTGATGATTTTAAGGATGAGGTTGTGGAATCTGATGATGAAGATGATGATGATGAAGAC GATGATATGAGTAAGAATCAAACTGCCGTGAGTGATGCGTCGGAAGAGGAAGATGAAGAAAGGCATGCAAGGATGTTACAAGGAGTTACTGGTATGCCCA CAGAGGCTTTTGAAGGGAAGAGGAAGAATAAGAAGTTGAAGGACTCTGTTTTACCGGAGCTTGATCAAGAGTCAGAATATAATTCTAGCCGTGATGTTGT GGATGGTGATGGACTCATTACCATTGAGGATCTTCTGAATCCTCTTCATGAAAAACCTGGTTTTGGAGAACTTAGGAAGAGAATGAACGAAATTGAGAAG AAAGCTAGAACTATTCATGCACCTCTTCCAAAGGCAGATCAAGCAAAGATAGAGAGAAAGGCAGCATATGAAAGATCAAAGAAAGATGTCACGAAGTGGC AGCCCATTATTCAGAAAAATAGAGAGGCACCGACTGTCTTCTTTGATGAAAATGTCGATTTAGAGTTTTCAACTGTTGGAGCAATAGCTTCTGAATTCGA ACCCAGATCTGAATTTGAGATGAAAATGGCTGCACTAGTTCGGGATGACAAAGTTATGGAAGCTCATAAAAAGGACGGTTCTAGGCTTCTTGAAATGAAC ATGGTCTCTATTGAAGATGAAAAGGATAGGCAAAATCGGATTGCTAAAATGCATAGCCTTCTTTTTCGTCATGAATGGAAGGCAAAGCATATGAAAAAAA TCAAGTCCAAAACATATCATCGTTTGTTGAAGAAAGATAGGCTGAAGGAAGAATCTTCTCGGATTGAAATGGACCCTGAAGCCGCTAAAGAATATGCGAT GAAACAAGAGCGCCAGAGGGCAGAGGAACGCATGACTCTGAGACACAAAAACCAGAATCGGTGGGCTAAGCGTATTTTACAACGTGGTTTAAATAGCCAA GATGAAGGAACTCGTGCAGCCATAGCTGAACAACTTCAAAGGCATGCTGCGTTGACTAGGAAAATGCACTCTATGAAGGATAGTAGTAGCAGCAGTGATG ATACTAGTGATGAGGATGAAAACTCTGATGGATCTGACCAGGATAGGGTTTCTAAGCTTTTGGAAAAAGCAAAAGAGAAGACAAAGAGAGTGTTAGCGGA AGATGATGAAGTTCCCAAGTCAGGATTGCTTTCTTTACCTTTTATGAGGCGTGGATTGGAGAAAAGAAAAGAGGCAGCTGTTGAAGAAGCCAACATTCTT ATTCAAGAATATGAAGATTCCTTGATGAAGCTGGGGAGTTCTGGTGGCTCAGAAGATCCAAAAGGTGCTTCTGTCAGTGGCAGAAGGGTATTTGGAACAG CTAAGCCCCAGATTTCCGATGCAGGCAATAAGGTAAAATCAGATAATATTCATGGCAGCAGTGATAGCGAGGATGACATGAGGGACAACAAAAGCAACGA TATAGAGAATGAGGAAGGCAATGTTTTGCAGACGGGTGTAAGCAATGGTTCAGTATTAATTCAAGAAGACACTGATAATCAACAGGATTCTTCTCTTAAG AACTTCGATGAGATTATTACAGTTCCCGGGCCAGAAACTCCATATGAAGTTTCCATATTTGCGTCAGATACATGGCAAAAGGCAAAGAACAAAAGTGAAG GCAAAACTATCAAGAAGCGTTCAAAGCTTACAGGTCCTGCTAGGCAAGATGTAAAGGATACTGGAAAGGAAATCGGAGAGGATAGTGATACAGATAGTGA AGGACAGATGGTGGATGGAATTCTGTCTTCTGGATCTAAACAGTCATATGAACTTCCTTCTCAAAAGGAACTCATTCAACAAACTTTTGCGGGAGATGAT GTAGAAGATGATTTTGAAAAGGATAAACAGGAGATCCTCAACAGAGAAAACCCTGAGCCAGAAAAGCCTGTTTCACTTCCTGGATGGGGCCAATGGACAC ATATACAGCAGAAGAAAGGTGAACCATCTTGGATGCTGAAAGAGCATGAAAATGCCCAGAGGAAAAGGGCAGAAGCTCTAAAAAGGAGGAAAGATGCTCA ACTAAAAAATGTGATCATCTCTGAGAAGTTAGATAAGAAGGCCGAGAAGCTCCATACAAAATCATTACCTTTCCCCTTTACTTCGAAAGAGATGTTCGAA CAGAGCATGCGAGTACCTATCGGACCTGAATTTAATCCAGCAACTGCAATTGGACCACTTAACAGGCCTGAGGTGGTGAAGAGACCAGGTGTTATAATAA AACCAATAGAGTTTGAGGAAGTGAATCCTCATGAGCAACGGAGCGAAGATAAGCATAAATTGAAGCGAAGTAAAGGCGAAGGTAGCAAATCCGTGAAAAA GATGAAAGTTGATCGAAAAAGGTAATCTTCGTGTAGTTCGTCTTCTGTTACAGTTCAAGAAATACTTGCAGTTCGGTCGAAGGGAAGGCAAAGAAAAGGA AACAGAGGTTAAAACAAAAGGCCTAAAAAGGAAGGAAGGAAGTTTATGGTAGTATCCAAGAAAGAGAATAAAATAGAATTCAAGAGAGAGGGTTTAATTT TATGTATTTTACTCACATAAGTTGTTATTGATTAATTCTATACTTGCTGAAAATTTCACATGTTTAATTTTGTCATTGTATGATGGTGTAATGGTATTTT ATTTCAAGTATAATTTTCATATCTTGTGTTTGATATATCTGAGTTGGAATTTTGAGTTCATC BLAST |
Tissue | flowers |
Gene name | LI_gene_40759; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_274819
Blastp | U3 small nucleolar RNA-associated protein 14 from Saccharomyces with 27.14% of identity |
---|---|
Blastx | U3 small nucleolar RNA-associated protein 14 from Saccharomyces with 27.14% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (YML093W) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019418839.1) |
Pfam | Utp14 protein (PF04615.12) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |