| Id Trinity | FTRINITY_DN54224_c0_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_273949 |
| Sequence | AATAATCAAACCAAACCAAACCAAACCAAACATTCTTATCGGTTTGGTTCCTAATCTTCCCATAAAACAAAACCAAACTAGACTAGGTTGTTGAGAATAG CAACCAAAATTCCTTTGAAGAGGAGGTCATGTATCCAACTAGGATGAGAAGTATAGTGTTTTTTTAATCTCATCAATGCCTACTTTCTATTCAGCCGTTG AATTTTTCTGAAGAAAAAATAAATTAATAGCCACATTGGTAAGTGATTTTGGGATTGCAATTTTTTTAATGAAGAAGTGAGATGTTTCCAGCTATGACTT CATTTCCATTGAAGAGAATAGATATAAAGAGAGTAGTGAGTGATCGATTAGTTAGTGGACGTGGAAGAAGGTTAAGAACCGCGTCAATATCTCAATCCCA TTCCTTTTACATGGAATGGCAGATCCTGCTAGTTTTGGGAATCATGAGCGTGATACTGAGCAAGTATTCTTTGCTTTAAAAAAGGGAACTCAGTTAGTTA AGTATAGTCGGAAAGGGAAGCCAAAATTTTGTCCATTCAGGCTCTCACCGTGGCATTACCAGGATGAAACATCACTGATTTGGATTTCTCGCGGAAAGGA AAAGAAACTGAATTTATCTTCTGTTACACGAATCATCGCTGGACAGAGAACAGCTGTCTTTAGAAGATATTTGCGCCCTGAAAAGGATTATCTGTCATTT TCACTTATTTACAGAAAAGGGGAACGATCACTTGATTTGATCTGCAAGGACAAAGTTGAGGTTGAGGTATGGTTTGAAGGCCTCAAGGCATTAATTTCTA CTGGAACGCGTATTAGGCGCACTAGAAGTGACTTTACTGATGTGAGTTTTTGTAGAAAACTGTTTCCATGATAATTGTGTTGTTGGAAAGTTTTTTCCCC TTTAGAAATGATTTTTTATTGAAAAAGGACTCTTTCAGGTTTAATCTGACAAGTCTCACAAACCTGAGTAAATTGTGAAAAAGTTGTTTTTATTAGAAAA AAACTTGATTGATTATTTTGTAACTAATCACATTTTCTCATCTCTTTCTCCACAGTGTTTGGTGGAGACTCATGGATTTGTTTTATATTTCTAACTATAT TTTGAGAATATTTCAGCTAGGTACTTCTTTTAAATTTCATCTGCAGGATAGCATTGACTTGGGTCAGAATGACCGTCCTTCCTTTGGGACACTAGATTTT ACTTCAAGCATTGTTCGTGGTAGGTTTTCAGTTGACTCAGATGTAGGGCCAGAACGTGCAAATGTGCCAATAAGGACAAGTATTGGAGATGGTTCCCGTG TTAGTGTGTCAAGTATTGGCTACGCAAGTAGTGTAGCATCAGGACCAGATGACTTCGAGTCTCTAGGTGATGTTTATATATGGGGAAAGGTTTGGACAGA CGGGATTTCATCTGATGGGTTGGGGAGTCAAGTCCCTTCTAAGATAGATGTTCTTGCTCCTAAGGCATTGGAATCTAACGTCGTTATTGATGTTTATCAG ATAGCTTCTGGTGTACGTCACATTGCTCTAGTTACAAGGCAAGGAGAGGTTTTTACTTGGGGAGAGGAATCTGGTGGAAGACTTGGTCATGGGTCTGATA AAGATTTTTGTCAGCCACATCTTGTGGAGTCCCTGGCAATGACTAGCGTGAGTTTTGTTTCATGCGGTGAATTTCATACTTGTGCTGTATCTACATCTGG TGATCTTTACACCTGGGGTGATGGGACACATAATGTTGGACTTCTCGGTCATGGCACTAATGTTAGTCACTGGATACCAAAGAGGGTCAGTGGCCCTTTA GAAGGACTTAAGGTTGTATCTCTAGCTTGTGGCTCAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_40817; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_273949
| Blastp | PH, RCC1 and FYVE domains-containing protein 1 from Arabidopsis with 61.17% of identity |
|---|---|
| Blastx | PH, RCC1 and FYVE domains-containing protein 1 from Arabidopsis with 61.17% of identity |
| Eggnog | regulator of chromosome condensation(COG5184) |
| Kegg | Link to kegg annotations (AT1G76950) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431959.1) |
| Pfam | Regulator of chromosome condensation (RCC1) repeat (PF00415.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |