| Id Trinity | FTRINITY_DN54236_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_274232 |
| Sequence | TTTAATTTTTGTTGTTGTTCTTCTTCCTAAAGTTTTGGTGAATTTGATTAGCCTTATCTTAGATTTGAATCTGACCCACACACCTCTTTGTAAATCATTC CGAAGCTGCTTTAAACAAACAAACAAACAAAACAGTTACCTCACTTAACTTTTTTTAGCTGCTCAACTATTCCACCCAAACCAAACCCTCTTTCTCTTTC TCTCTCTCTATTCTCCTTTTCATCTCTTCGCATTCCAATTCCGTATCAGGTTTATACGTTTCTCTTTTATTTATTTATTAATTATTAATTCATCTTTCCA TTCTCAATTAATTTAAACAATTCTTCTGACTCCAACATCTCTCGTATCTTTTATGCACTGATTATTATCAATAAATAATTTCCACGCTCCATCGTAATCA TAATTATTATGAATTAATTTGTGGAATATTTATTTATATTGTGATATAGCGAGTGGTGATAATCGGTTACAGTTATTGGTGGCGGTGGAGATGGGAGGTT GCTGTTGTTGTTCATCGAAGGAGACTCAATTGAACGCGCCACCTCGTTCTCCGTACTATTACTACCCAAGATTATCCGAGGAGCATGTCCCACTATCATC TCACCACAATGCTGCCTCTGGTTTTTCTGGAGGGCTCTTAGTTGATACCAATCTAGACACTTCGAGTCCTGATACTTATAGACCGCCTCCTGCTCCTATC CCTTTCAATGTTACTTTTGGTGTCACTCAAACACCACCCGCGGCTCAAGAAATTTGTGTTGACAAGACTGATGCATCCCTGCATCCTGCAAATTCTGATT CAAACCAAGAAACCGTTACCGGGGACAATCATGGGGCCTCAGCTAAGCCAGACGAGCTGAAGGAATCAGATTGCAATGTTCAGACTGCTTTAGAACTTGA TTCGGCAAAGGATTCTGAAGTTCAACTTCCGAAGTTGGCAGAACCTGTCAGTTTTGTGGAAGAAGAGGATACATGCCCAATTTGTTTAGAAGAGTATGAT GCAGAGAATCCAAAACTCCTCACAAAATGTGACCATCATTTTCACCTGGCATGCATTCTTGAATGGATGGAAAGAAGTGAAACTTGTCCAGTGTGTGATC AGGATATGGTTTTAGACCTTCCATTAGATTGATATTATCAACAACTCAGTTCTAATACAACAACAACAACCAACTCAGTTGTAATACACTGATATAATAT TTGAGAGCCAGGTTACAAAATAAAATGTTTTCTGTTCTGGCAACCCAAGTTTATGGTTGTATTTTGTTTCTTAAGCTTCCTCTGTTTCCCAAAGATTTAT TCCATTTTTTATGCCCAGTCCCTTTCGTTGGATACGGGGAAATTAAAGAGAAGTAGAATTTACCATGGTGATAAAGTGGGTTCCAAATGAAGTCTCCTTC CATTTAGTAGTTCTTTAATTAGAAAGTTGAGGTCATATGAGTATACTATACGAACTGGTGTAAATAGAATTTGTGATGACTTGCACAAATTATCTGTGGA GACATGTTTGATACAGAACAAAGCGGTCAATATGTTTTTTCTCCTATTTTGTTGGTGTGTCTGTCACTATTATACATTTGGTTTCATCTGTTATTTTTTG GGTCTTGTGGTTTTGCTGGTATGCATTGAATGGGAATGATCGAATGAAATGATATCCACGAATCACATGGATTAGGAGAAGACAAACACTAGTCAAATCA AATAATTGAGCTTCTTTTTGTGACCACAATTTAGTTATGAATAAGTATATTTATGTTGTGGCAAATGCTTACTCATTTTTTAGTGAGACTTGCAATTTTG TGCTTTATCAAACTTCATATGTAGTTCAATTGTTATGTCTAAATAATCAGCTGCGTCGTTCCGTAGTTTTTCAAATTCTTTGTATGATGTTTATGTTGGG TGCTTTTGTTTGCATAAGGTCTTTAGTTTAATCCTTCTATTCCTTTGTGGGAAATCAAATCCACC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_40929; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_274232
| Blastp | Probable E3 ubiquitin-protein ligase RHB1A from Arabidopsis with 40.19% of identity |
|---|---|
| Blastx | Probable E3 ubiquitin-protein ligase RHB1A from Arabidopsis with 38.65% of identity |
| Eggnog | zinc ion binding(ENOG41121N2) |
| Kegg | Link to kegg annotations (AT4G00335) |
| CantataDB | Link to cantataDB annotations (CNT0000117) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019423305.1) |
| Pfam | RING-H2 zinc finger domain (PF12678.6) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |