Ll_transcript_274234

• Id Trinity: FTRINITY_DN54236_c0_g1_i5
• Name Transcript: Ll_transcript_274234
• Sequence: TTTAATTTTTGTTGTTGTTCTTCTTCCTAAAGTTTTGGTGAATTTGATTAGCCTTATCTTAGATTTGAATCTGACCCACACACCTCTTTGTAAATCATTC CGAAGCTGCTTTAAACAAACAAACAAACAAAACAGTTACCTCACTTAACTTTTTTTAGCTGCTCAACTATTCCACCCAAACCAAACCCTCTTTCTCTTTC TCTCTCTCTATTCTCCTTTTCATCTCTTCGCATTCCAATTCCGTATCAGTTATTGGTGGCGGTGGAGATGGGAGGTTGCTGTTGTTGTTCATCGAAGGAG ACTCAATTGAACGCGCCACCTCGTTCTCCGTACTATTACTACCCAAGATTATCCGAGGAGCATGTCCCACTATCATCTCACCACAATGCTGCCTCTGGTT TTTCTGGAGGGCTCTTAGTTGATACCAATCTAGACACTTCGAGTCCTGATACTTATAGACCGCCTCCTGCTCCTATCCCTTTCAATGTTACTTTTGGTGT CACTCAAACACCACCCGCGGCTCAAGAAATTTGTGTTGACAAGACTGATGCATCCCTGCATCCTGCAAATTCTGATTCAAACCAAGAAACCGTTACCGGG GACAATCATGGGGCCTCAGCTAAGCCAGACGAGCTGAAGGAATCAGATTGCAATGTTCAGACTGCTTTAGAACTTGATTCGGCAAAGGATTCTGAAGTTC AACTTCCGAAGTTGGCAGAACCTGTCAGTTTTGTGGAAGAAGAGGATACATGCCCAATTTGTTTAGAAGAGTATGATGCAGAGAATCCAAAACTCCTCAC AAAATGTGACCATCATTTTCACCTGGCATGCATTCTTGAATGGATGGAAAGAAGTGAAACTTGTCCAGTGTGTGATCAGGATATGGTTTTAGACCTTCCA TTAGATTGATATTATCAACAACTCAGTTCTAATACAACAACAACAACCAACTCAGTTGTAATACACTGATATAATATTTGAGAGCCAGGTTACAAAATAA AATGTTTTCTGTTCTGGCAACCCAAGTTTATGGTTGTATTTTGTTTCTTAAGCTTCCTCTGTTTCCCAAAGATTTATTCCATTTTTTATGCCCAGTCCCT TTCGTTGGATACGGGGAAATTAAAGAGAAGTAGAATTTACCATGGTGATAAAGTGGGTTCCAAATGAAGTCTCCTTCCATTTAGTAGTTCTTTAATTAGA AAGTTGAGGTCATATGAGTATACTATACGAACTGGTGTAAATAGAATTTGTGATGACTTGCACAAATTATCTGTGGAGACATGTTTGATACAGAACAAAG CGGTCAATATGTTTTTTCTCCTATTTTGTTGGTGTGTCTGTCACTATTATACATTTGGTTTCATCTGTTATTTTTTGGGTCTTGTGGTTTTGCTGGTATG CATTGAATGGGAATGATCGAATGAAATGATATCCACGAATCACATGGATTAGGAGAAGACAAACACTAGTCAAATCAAATAATTGAGCTTCTTTTTGTGA CCACAATTTAGTTATGAATAAGTATATTTATGTTGTGGCAAATGCTTACTCATTTTTTAGTGAGACTTGCAATTTTGTGCTTTATCAAACTTCATATGTA GTTCAATTGTTATGTCTAAATAATCAGCTGCGTCGTTCCGTAGTTTTTCAAATTCTTTGTATGATGTTTATGTTGGGTGCTTTTGTTTGCATAAGGTCTT TAGTTTAATCCTTCTATTCCTTTGTGGGAAATCAAATCCACC
• Tissue: flowers
• Gene name: LI_gene_40929;
• Additional information: details;

Expression of Ll_transcript_274234

FPKM

• FPAB: 2.4
• FPNAB: 1.3
• LF1: 0.8
• LF2: 0.9
• LF3: 1.2
• LF4: 1.5
• UF1: 0.3
• UF2: 0.8
• UF3: 1.2
• UF4: 1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_274234

• Blastp: Probable E3 ubiquitin-protein ligase RHB1A from Arabidopsis with 40.19% of identity
• Blastx: Probable E3 ubiquitin-protein ligase RHB1A from Arabidopsis with 38.65% of identity
• Eggnog: zinc ion binding(ENOG41121N2)
• Kegg: Link to kegg annotations (AT4G00335)
• CantataDB: Link to cantataDB annotations (CNT0000117)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019423305.1)
• Pfam: RING-H2 zinc finger domain (PF12678.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;