Ll_transcript_272712

Id TrinityFTRINITY_DN54238_c4_g1_i1
Name TranscriptLl_transcript_272712
SequenceTTACCATTCTACTCAAAATCTTCTCTCTCTCTTCAAACCAAAACCCTAACCGCTTCGATCTTCCTCTCTTCTATTTAGGACTGAGGTTTTTTTTTGAGTT GGAGGGAGCAAATGGAATCTGCGAATGACCCAACGGAATTGGCTCAACTCCCTTCGGGCTATAATGATAGAGAGCTACTTATAAAGAGTGGCACTCCGAT TCGACTTCTTCAAGATTATGCTTCTGATGATGAAATTTCAGATAATAATGATAATGCAGATGCTAATGTTTTGACACTCATACCAGCAGAAGCTCCTGCC ATTGGTTTTTCGGTTGCACGAAAGCAAAATGATTCTTTGGAGACTGATATTGGATCTAAGAGTGTTACTGAGCAGGAAGATGAGAGGAAAACAACTTCAA AATTGTTGGAACCGAAGAATATTCTGGAAGTAGATGAATTTGGAAGGTATCGTAGGGAAGGTCCAGCAAATAGTGATTCTGATGACGATTCTCGCTATAG TCGGACTGGTAGGCTAAATAGAAGAGACAGAAGCTCTAGTCATAGCCGATCACCTCGGCGCAGGAGGAGTAGGAGGAGGAGTCCCTTGAGGAGAAGGGGT AGAAGAAGCCGGTCTCGCAGCTTTTCCCCTCGGCGCCGCAGAAGCAGGAGTAAGTCTCCCATCTTAAGGCGATCCGGTGAGTTTGGTAGTGTTAATGTGA AAAGGGACAATGGTCAGCAGTGCTTTGACTTCTCTAGAGGAAGATGCTATCGTGGAGCATCTTGTCGGTACATTCACCTTGAAACTAACAGGAATTCTGG TTCAAGGCGCTTCACGAATAACCATGATCTTGAAGTCCATTCTCATGAAAAAAGTCTTGGTATTAATGAAGTCTTGAAGAATATTTACTCTAACGTATCA GATCATGAGCATGATGGAGTCAGAAGTCAGGATGCGAACCTTTCCCAGAATGCAACTAGTCAGGAAGTAGAGCACAGAAAAGAAGATTCTGTTACGCATG CTGTTGTGTGTACTACCTCCGGTCTCGACAATCAATTAGTCAATAATGATCCGAATAAATTTGAAAAAAGCTTCAGAAAGGCTGCTCCCGACATGCAGGA AACTTTAGTTGTCAGAGAGGAGCATAAGACTTCAGTCCATGACAATGATTGTTATCAGAAAGTAGTGAATTCTCATCAGCCATACTTGGTTGATGGTTTT CAACCTGGTGGTACATATGAAAATGTCATTCCCTCAGGAGATGGTTCATTTGTTCCGCAAATACAGTCCAATGTTTCGGTTGTTGTTCCAGAACATTCCG CCCAGTCATCTCAGCACATAAGTGTGTCCTTTGTATCTGATTCATCATTTGATAAAAAACCGACGACTTCTGCTACTGCTAGTATGGTTTCTAGTAGTGA ACCAGTACAATATATATCATCATCAACTCAGCAACAGTCAATACAGCCACATAGTAGTTCCGCGGCCGGATTTCCGGTGTTGCCTCCTCCTCCTCCTACT CTTCCTCTTCCCCCTCCTCCTCCCCTTCCTCTTCCTCGTCCCCCTCCTCCTCCTCCTGTTGTTTCAGATTCCCAGGGTGAAAAAATTGTGCATATGCCAC AAATTCCAAGGGAATATGGTGTGATGCAGCAAAATGCTTTCTTTCCTTTTCAATTCGCTACCAGAGGAAAATTTGAACATTATCCAGCTCCATTGCACTC ACAAAATTTTCAATTTCAATTACCACCTAACAGGACATCCTTGCCGCTACCACCACCACCACCACCACCACCATTGGCAGTAAACAATTCCAGTTTTACT TCAGGAGTTGCAGAGCCATATGTATCTGTAAAATTTAATCAGAATCAATTGCATTCAACTAACTTTGTTTCTCAGACTTCCGTGACACATGGCTTGCCGC CTCAGAGTTCTGGGTTTGAGAACCAAGCATACACTTCAATGCAGGATCATTCACGATCTTTAATGCTTAGAGAAGCTTCATCTCCAAAGCATCTGCCTCC GGGCAACCCAGCAAGTCAACCACTTTCAGGCTCTAATCTTAATAGAGCTGACCCTTATAAGCAGCTTTCGATGCAGGATTCATCATCACAGCAGCAACAG TCAATTTATAATTTCCCATATTCTGCATCCGAGATTAATTTGAGCATGCCTGCGGAGAATCTTGCTGCATCCAGATTTCAACCAGATGCTCTGGATAGCA ATCACTCAACCTCTCTTCCTGCTGTTGGGGGATCACAAATTTCTGCACATTATAATCCTTATGCATCAACCTTTGAGCAGCCACCAAGTTCCAAATTCAT GTCAAGCATTTCTAGACAAGAAAATGACATGATTCATAGTAACAATTATGGTTCTTATGTATTGAACCATACTCCTATTATTCGGGAAGGTGTTGATACT GGCGGTGGATCAAGACAATATGCTTCCTCTCCAAAATCTGCTAGAGTTGATGGTCAGTTGTTACCTAAGCCTGGTAGTAACCTATATGATCCACTATTTG ATTGTATTGAAGCATCGTCCTCTTCTCTGAAGAAGCTTAATTGTGACCAGAAGCAGGAGGTTACAGGTGAATCCAACATCAGCCCGAGGCCAAAAAGTTC TTCCATGTCTTTAGACACGGAAGAGAAAAACAAACATGAGAATGTTGGGGATGTTGCCTCTACCAGTTCTCAAAGTAATGATGAATATGGTGAGACAGCA GATGCAGAAGTCGGTGACGTTGAAAATGAGAGCCTAAGTAATCATGTGGATATTGCAAATATGACTCCAGGGGATGGTGAGATTAATCAGGTCAAGTCTC CTGGGAATGGGAAAAGAAAGAAGAGCAGCGATTCTAGATCGATGAAACTGTTCAAAATTTCCATTGCGAACTTCGTAAAGGATGTTTTGAAACCATCATG GCGGCAGGGTAATATGAGTAAGGTGGTTTTCAAAACCATTGTTAAAAAGA BLAST
Tissueflowers
Gene nameLI_gene_40959; 
Additional informationdetails; 

Expression of Ll_transcript_272712

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_272712
BlastpZinc finger CCCH domain-containing protein 55 from Oryza sativa with 52.54% of identity
BlastxZinc finger CCCH domain-containing protein 55 from Oryza sativa with 61.76% of identity
Eggnogzinc finger CCCH domain-containing protein(ENOG410ZKTI)
KeggLink to kegg annotations (4344611)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019446909.1)
Pfam-
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;