| Id Trinity | FTRINITY_DN54238_c4_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_272718 |
| Sequence | TTACCATTCTACTCAAAATCTTCTCTCTCTCTTCAAACCAAAACCCTAACCGCTTCGATCTTCCTCTCTTCTATTTAGGACTGAGGTTTTTTTTTGAGTT GGAGGGAGCAAATGGAATCTGCGAATGACCCAACGGAATTGGCTCAACTCCCTTCGGGCTATAATGATAGAGAGCTACTTATAAAGAGTGGCACTCCGAT TCGACTTCTTCAAGATTATGCTTCTGATGATGAAATTTCAGATAATAATGATAATGCAGATGCTAATGTTTTGACACTCATACCAGCAGAAGCTCCTGCC ATTGGTTTTTCGGTTGCACGAAAGCAAAATGATTCTTTGGAGACTGATATTGGATCTAAGAGTGTTACTGAGCAGGAAGATGAGAGGAAAACAACTTCAA AATTGTTGGAACCGAAGAATATTCTGGAAGTAGATGAATTTGGAAGGTATCGTAGGGAAGGTCCAGCAAATAGTGATTCTGATGACGATTCTCGCTATAG TCGGACTGGTAGGCTAAATAGAAGAGACAGAAGCTCTAGTCATAGCCGATCACCTCGGCGCAGGAGGAGTAGGAGGAGGAGTCCCTTGAGGAGAAGGGGT AGAAGAAGCCGGTCTCGCAGCTTTTCCCCTCGGCGCCGCAGAAGCAGGAGTAAGTCTCCCATCTTAAGGCGATCCGGTGAGTTTGGTAGTGTTAATGTGA AAAGGGACAATGGTCAGCAGTGCTTTGACTTCTCTAGAGGAAGATGCTATCGTGGAGCATCTTGTCGGTACATTCACCTTGAAACTAACAGGAATTCTGG TTCAAGGCGCTTCACGAATAACCATGATCTTGAAGTCCATTCTCATGAAAAAAGTCTTGGTATTAATGAAGTCTTGAAGAATATTTACTCTAACGTATCA GATCATGAGCATGATGGAGTCAGAAGTCAGGATGCGAACCTTTCCCAGAATGCAACTAGTCAGGAAGTAGAGCACAGAAAAGAAGATTCTGTTACGCATG CTGTTGTGTGTACTACCTCCGGTCTCGACAATCAATTAGTCAATAATGATCCGAATAAATTTGAAAAAAGCTTCAGAAAGGCTGCTCCCGACATGCAGGA AACTTTAGTTGTCAGAGAGGAGCATAAGACTTCAGTCCATGACAATGATTGTTATCAGAAAGTAGTGAATTCTCATCAGCCATACTTGGTTGATGGTTTT CAACCTGGTGGTACATATGAAAATGTCATTCCCTCAGGAGATGGTTCATTTGTTCCGCAAATACAGTCCAATGTTTCGGTTGTTGTTCCAGAACATTCCG CCCAGTCATCTCAGCACATAAGTGTGTCCTTTGTATCTGATTCATCATTTGATAAAAAACCGACGACTTCTGCTACTGCTAGTATGGTTTCTAGTAGTGA ACCAGTACAATATATATCATCATCAACTCAGCAACAGTCAATACAGCCACATAGTAGTTCCGCGGCCGGATTTCCGGTGTTGCCTCCTCCTCCTCCTACT CTTCCTCTTCCCCCTCCTCCTCCCCTTCCTCTTCCTCGTCCCCCTCCTCCTCCTCCTGTTGTTTCAGATTCCCAGGGTGAAAAAATTGTGCATATGCCAC AAATTCCAAGGGAATATGGTGTGATGCAGCAAAATGCTTTCTTTCCTTTTCAATTCGCTACCAGAGGAAAATTTGAACATTATCCAGCTCCATTGCACTC ACAAAATTTTCAATTTCAATTACCACCTAACAGGACATCCTTGCCGCTACCACCACCACCACCACCACCACCACCATTGGCAGTAAACAATTCCAGTTTT ACTTCAGGAGTTGCAGAGCCATATGTATCTGTAAAATTTAATCAGAATCAATTGCATTCAACTAACTTTGTTTCTCAGACTTCCGTGACACATGGCTTGC CGCCTCAGAGTTCTGGGTTTGAGAACCAAGCATACACTTCAATGCAGGATCATTCACGATCTTTAATGCTTAGAGAAGCTTCATCTCCAAAGCATCTGCC TCCGGGCAACCCAGCAAGTCAACCACTTTCAGGCTCTAATCTTAATAGAGCTGACCCTTATAAGCAGCTTTCGATGCAGGATTCATCATCACAGCAGCAA CAGTCAATTTATAATTTCCCATATTCTGCATCCGAGATTAATTTGAGCATGCCTGCGGAGAATCTTGCTGCATCCAGATTTCAACCAGATGCTCTGGATA GCAATCACTCAACCTCTCTTCCTGCTGTTGGGGGATCACAAATTTCTGCACATTATAATCCTTATGCATCAACCTTTGAGCAGCCACCAAGTTCCAAATT CATGTCAAGCATTTCTAGACAAGAAAATGACATGATTCATAGTAACAATTATGGTTCTTATGTATTGAACCATACTCCTATTATTCGGGAAGGTGTTGAT ACTGGCGGTGGATCAAGACAATATGCTTCCTCTCCAAAATCTGCTAGAGTTGATGGTCAGTTGTTACCTAAGCCTGGTAGTAACCTATATGATCCACTAT TTGATTGTATTGAAGCATCGTCCTCTTCTCTGAAGAAGCTTAATTGTGACCAGAAGCAGGAGGTTACAGGTGAATCCAACATCAGCCCGAGGCCAAAAAG TTCTTCCATGTCTTTAGACACGGAAGAGAAAAACAAACATGAGAATGTTGGGGATGTTGCCTCTACCAGTTCTCAAAGTAATGATGAATATGGTGAGACA GCAGATGCAGAAGTCGGTGACGTTGAAAATGAGAGCCTAAGTAATCATGTGGATATTGCAAATATGACTCCAGGGGATGGTGAGATTAATCAGGTCAAGT CTCCTGGGAATGGGAAAAGAAAGAAGAGCAGCGATTCTAGATCGATGAAACTGTTCAAAATTTCCATTGCGAACTTCGTAAAGGATGTTTTGAAACCATC ATGGCGGCAGGGTAATATGAGTAAGGTGGTTTTCAAAACCATTGTTAAAAAGA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_40959; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_272718
| Blastp | Zinc finger CCCH domain-containing protein 55 from Oryza sativa with 52.54% of identity |
|---|---|
| Blastx | Zinc finger CCCH domain-containing protein 55 from Oryza sativa with 61.76% of identity |
| Eggnog | zinc finger CCCH domain-containing protein(ENOG410ZKTI) |
| Kegg | Link to kegg annotations (4344611) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446909.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |