| Id Trinity | FTRINITY_DN54247_c7_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_274365 |
| Sequence | ATCAAACCACGGTAATTGTTAAGAGTTTGAATAGATATCTTGGCCCATATCACCTCATTCCTTGCCCCTTGAATATCCCCTTATCAAAAGTAAAATAAAA CCTGAACAATTGCATTTTCGTATATGAAGTTTGATTTGCAGCCAAAAAAATTGAAAAGGACTTGAGCATTTTCCGTTTAACAGATAAAAACCTTGCATAA ATCTGATTTGATAATACTTGATAGCTTTGTGAAGTTTAATCTTTTGGCAGGATAGGGCTTCATGTTCTTCGTTCATTCAAAACTTTTATGTTCTACCATG TTTATAATATCTGTTACAGGATCGGAATTTGTTATTATTTCTGTGATCCTCATTTAACTGGAGTTGACAATCTCACAAATGGTAAAAGAACGTAGACTGA TATTAATTAAAATTTAGAAGCCTTTGTTGTTGTTATATAAACTTGGAGGGGGCACTAGGGAAATGTTCCTTAGAGGAGGTTAACATGTATTCACTAGATC AGGATTTAATTGTGTCATATTTTCTGGAGGAATTTGGTATGCGAAATGTACCATCTCATGGCCAATGGAAAAGCAAGATGACTGATGATTCCATTATTTT TTTGTTACCTTTTCTTCTTTTGTAGATATCACATTGTTGGCACTAAGGGTATATACTATGCACGTGAACCATATTCCAATGTTGATGCTGTGCACGTGAC TCGTTTTATAGGGCTGGCTTCTGTTGGAAATAGAGATAAGCAGAAATTTATTCATGCAATTTCTCCCACACCTGCATCCAGCATGTCTTCAACTGAGATT GCCATGAAAACCACAAATACCACCTTATCGCCATACACATTTATGGAGAAAAGCACTTCTCCGAAGGATGCTTCAAAGAGATCCAGCGATGGCATCTCTG ATTCTCAACATTGGAGATATGATGTATCTCAAAAGCGACAGAAACATGGAGCAGAAAATGGTAATAAGTTGTGTTTCAAATTTGTATCTTCTGGCTCTTG TCCACGTGGAGAGGAGTGCTATTTTCGACACGACTCAGATGCAAGGGAACACTCTATGAGAGGTGTTTGTTTTGAATTTCTGAACAAGGGAAAGTGTGAA AGGGGCCCTGATTGCAACTTTAAGCATAGCTTGCAGGAGGAAGATGATAGGCATTCTTCCAGGAGGCCTGGATCTGAAAATATTAGGTCTAGCAGATCAA AAGAATGTTGGTTTTGCTTGTCAAGCCCCAATGTGGAGTCACATTTAATCATAAGCATTGGGGAAAATTACTACTTGGCACTGGCTAAAGGTCCACTAGT TGATGACCATGTGCTGATAATACCAGTTGAGCATATGCCAAGTACCTTATCTCTGTCATCTGAATCTGAAGATGGTCTCTTTAGGTTCCAGAACAGTCTC ATGAGGTATTGCAAGAACCAAGGAAAAGATGTCATCTTTTTCGAGTGGGTTTCTGTTCGTGGCACTCATGCCAATCTGCAGGTAAAAGTAGTTTCTATTG CAACTTGCAAGGATGGTTGAAATTCTGACAAGGACATGCTTTTCCACTTTGTTTATTTATTTATTTTTTATAGGCAAAGTTTTGACATGAGAGGGGAGGG GAATATTGTGCAGCTACCAGGGTTCGAACCCAACTGCTCACACTTTTTGTCCAGCAGCTTTACCAATTGAGCTGACTCTAATAATAGTGACTTGCCTCCT GTCCCCTTTTGTAGTTTTCTGCATTTCACTTTGGAATTCCACTGTATTCTTTCTTTCCATTTTCTTGGTTAGCTATTTTCATTTTTAGCTCTAACAATAA TAGCCTGTTAATTTGAAGTTCTGTTTTTTCTTTATGACTTCACTAGTAAAACTTTTAATTGATTAAATATTAAGTATTCCATACTCATTCTGTCCTTTTA TATAGGCCATTCCTATTCCATCTTCAAAAGCAGCAATGGCTGTTAAAGCATTCAATTTAGCTGCGCAGAAGTTGGGGTTTAAATTTATTGAAAAGAAATT TGATAGCATTTCTGATGGAAGAAAATTTTTGTCAACACAAATTGATGGGAACCAAAGTTTGTTCTATGCTGAAATCCCAGGGGGTACAGTGCTGCTGCAT CATGTTGAGGAGAAAGTGAAATTTCCTGCTCAATTTGGACGCGAGGTTCTGGCGGGGTTGCTTAAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_41043; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_274365
| Blastp | Zinc finger CCCH domain-containing protein 59 from Oryza sativa with 59.39% of identity |
|---|---|
| Blastx | Zinc finger CCCH domain-containing protein 59 from Oryza sativa with 59.11% of identity |
| Eggnog | CWF19-like 1, cell cycle control (S. pombe)(ENOG410XNRG) |
| Kegg | Link to kegg annotations (4346865) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019454834.1) |
| Pfam | RNA-binding, Nab2-type zinc finger (PF14608.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |