| Id Trinity | FTRINITY_DN54249_c4_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_274544 |
| Sequence | CTAACTTTTCTTTCTTTATTTGTTCTTTTACCTGTTAAACTAAAATTTTGAGCATGTGTGTTCAATATCCTTACTATATCATTGCACACTTTTCAATAGA TTTATATTTTTTGTTGTTATTGTTTTTTGGATGGTGTGGGTGGTTTCAGTTTCATTAGTTATGGCTGTTGTGATTATATCATTTTAAAGCAATTTTTGTA AATTCTCTTGTTATGCAGTGATGAAGGTAAAATTAGAAAAGTTTTGAAGGTGGAGCCACTCATGGATGGTTCTGGTCACTTATTTAACCTCAATGTTCAG AACAAGCTTGACAACATCGACGAAAATATCTTCATTCCTATTACAAAGGCAGAGTTGGCGGTTCTCAGCTCACTTTTCAATTTTATCATGCCATACCTTC TAGGTTGGCATACTTTTGGAAACTCTATAAAGCCAGATAATTCCAGCAAAGTGAATAGTGACAATCCAAGATATGGAGGAGACTATGAATGGAGCAGATA GATAGATAGATAGATAGGGATCAATCACTTTTGCTTCTAATCACTTCATGGTGTTATCAAGTGTAGAATATGTAGTGGGATCAATCACTTCAAGAGACAG TCAACATTTAGCACATCATGTTTCTTCTAATTGTCAATGGAGATGAAGTGTTGTATTTATAGTACACAAATATAAAGTTGTGTCCATTGAACCTAGTCAG GATGTTAGTAAGGAGAGTGAAGATAGTCCCTTCTTGCATTTGCTGCTCTTAATTAATCATCAAAACTTCACACAAGTGCAGTCATTTTCATGCATATTCA TATATAGTCTGCTTTGTTAATATGCATAATAGTATATTGTGTATTTAGGAGTGTTGCCGTAAATAAAAAATGTAGTAGTAACTATTTCTAAAACCAAAAA CTCAATGGTATGGATATATAAAATACACTAAATATAATCCTACACAATTTAGTAATTGTCCTTACTTTTGTTTATAGGAGTTATTTTCATCTCAAAAAAA TGTCACTAAGACTATTCATGAAATAGATGTTTTTGCAGTAATATTTTGTCCTTTAATTATACTTGCCTCCAAGTTTGTAGTATATGATAAATGTTACTGT CTTGGGTAATTTGGAAAACCATGAAGTATTCTAATGTTCTAATAAAGTAATAGTTAGAAGGTGTTATTCAATAATGTTATTAGTTCATAGTTTGGTTTGT GAATCTGATGATACTTTTTTTATTAGTCACTATTTTAAGCATGTCATTAACACTTGATCTGTACTTCTTATAAGATAAATAAATATTTGAAGAAGTAGAT GAACCTGGACATAACATTGGTCCATAGTGAGAATTGAAGAATATTGTGAAGTTGCAGGACATCTGATCATATCGATTGCCCACATGCCTCTCTGCATGTT TCCCAAAGTCTTCAGTTTCAACTTTAAAGTTATTTATCCTTTTCTGCTTTTCTGATACATACTCACAACTCACAACTCACACCTCATATATATGGAATCT AGCTAGTACCTCATTCTATGTACACACAATGTTGTGTACATAGAATGCTACACTGCTTTACTTATTTTATTTTTATACTTGTTTTACCTATAATTGCTGC ACATGATTTATTAGTTTTTTGTTTTGAATTATAAAATTCATGGCTATGAAAATGACTAAAAGGGTTTGAGAAGTGATGATTTGAATCACTTTAAGAGCAA GAAATGCAATAAGGGACTTTCTTCACTCTCCTTATCAAACATCCGGACCAGGTTCAGGAGACAGAAACTAAGGTTTCTCTGACATATATGACTGTACTAT ATATAAATAGAACAGTTGATGTGCATTTGTTGAGCATGACAACTCAGGAGTTAATTGTTGGCTGTCTCTTGAAGTTCCTATGAGCACTTCACACATGTGT ATCACTACTCTAATTAGAAAGAGTTAAGAGTGGTGTGAAGTGTTTGGAGGAACTTCAAGATTCATCTAACACTGATTACCAAGATTCAACTAACAAATGC AATAAGGGTTCAACTCTATGGTTCTGCATTGTCATTTTACATTTCACACTCGATTTATTACTTTTGTTCGTTACAATATAGTATAAGATTGATGTAAATA ATATATCCTTAAAATTATTAATGTATTTTGTAATTAACTAAAAATAATAAAAAAATGTTGAGTTGTATACAGAATTTGATTAGTGTTAATGTAATTTAGT GTTACTGAAATAATAATAGTATGATGAGGTATTTGATGGTAGAGGGTAAGGCCCTAAGCGAGCCCATGGGCTTAGATTAAGCAGCAAATGAGGGTGATGT GTATGTAGGTTAACATCCTTCATTCAGAGAGAGACTCAGAGAGAGAGAGACACACAGAGAGAGACACACAGAGAGAGACACAGAGAGAGACACAGACACA GAGAGAGAGAGAGAGAGAGAATGTTTGGGCGACGCAAGTTTCTTTCCTTTCCCTTAGTCATCGGGGCAGTGATCATTGGTGTTGTCTCTGGGAAAGCAAT ATTTGGAGCCCCACTTGAGGAGTATTGGAAAAAGAAGCATCAGGAAGAAGAAGCTGAAGCTGCTGCTGCAAAGGATAATCACTCATCTTCATCTTAGGAC TATTTCCTTCAATTGCATTATGCTCCAACTACTGTAACCATATTACAATTATGTTTTGCTTATTACTGTAAAATGCTCATTTTAATAATCAAATAATATT AAAACAACCTACACAATAGAGATAATCATATGTACATCAAAATTATTTCTTTTAAGATAATCATACGTTCAATAGAGATGGGATTGTTAACACCAAATAT GTTTTATACAGCAAGTAGTTTAAAAATAGGGGTATTCACATCAAAGGTCAAACAAAAATAAATAATTGCAAACTGCAAAAAACTATATCTGAAAACTAAT CTAAAATGAATTACATTGTTATACATTATTACATTTCACCAAATGAATTATTTTTGCTGATAAAAAATAAAACAATTGAGTAGTAAATAATGTATTAGTT TTATTATGAATTTGATGTATATGATAGAATATAGAGACATGTCTATTTTGCTACAAATTATTGTATATTGAATATTATTACCTTTAAAGTTTAAACAGTA ATTAATGTAAATGTAAAATGATACTAGGAATTTAAACCAACAAAAAAGAATAAAGGGAACGATCCGTGTCCATAAGCTTGTAGCATGTCTTGCCTTACTT GTAGCACCTTGCTCCTTCCTTCCCTCTCTCTCGGCCATCCTTTTGATCCTTTCCATCATTTTCATTTTCATTTTCATTTTCTATCTGCAATTCATTCATC ATAATACCAACACCAATâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_41063; |
| Additional information | - |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_274544
| Blastp | - |
|---|---|
| Blastx | Single-stranded DNA-binding protein WHY1, chloroplastic from Arabidopsis with 72.34% of identity |
| Eggnog | Single-stranded DNA-binding protein that functions in both chloroplasts and nucleus. In chloroplasts, maintains plastid genome stability by preventing break-induced and short homology- dependent illegitimate recombinations. In(ENOG41124UZ) |
| Kegg | Link to kegg annotations (AT1G14410) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019454669.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |